Protein–RNA interactions for Protein: Q8NC42

RNF149, E3 ubiquitin-protein ligase RNF149, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149Q8NC42 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
RNF149Q8NC42 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.99■■□□□ 1.59
RNF149Q8NC42 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
RNF149Q8NC42 AC019069.1-201ENST00000610008 1333 ntBASIC24.99■■□□□ 1.59
RNF149Q8NC42 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
RNF149Q8NC42 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
RNF149Q8NC42 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF149Q8NC42 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
RNF149Q8NC42 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF149Q8NC42 LINC00543-201ENST00000567234 1845 ntBASIC24.98■■□□□ 1.59
RNF149Q8NC42 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
RNF149Q8NC42 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.97■■□□□ 1.59
RNF149Q8NC42 UNC93B3-201ENST00000308076 687 ntBASIC24.97■■□□□ 1.59
RNF149Q8NC42 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RNF149Q8NC42 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF149Q8NC42 C17orf82-201ENST00000623772 1530 ntBASIC24.96■■□□□ 1.59
RNF149Q8NC42 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF149Q8NC42 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RNF149Q8NC42 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.96■■□□□ 1.59
RNF149Q8NC42 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.96■■□□□ 1.59
RNF149Q8NC42 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.96■■□□□ 1.59
RNF149Q8NC42 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF149Q8NC42 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF149Q8NC42 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.96■■□□□ 1.59
RNF149Q8NC42 AC141586.4-201ENST00000624558 1573 ntBASIC24.96■■□□□ 1.59
RNF149Q8NC42 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
RNF149Q8NC42 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RNF149Q8NC42 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RNF149Q8NC42 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.95■■□□□ 1.59
RNF149Q8NC42 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.95■■□□□ 1.59
RNF149Q8NC42 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
RNF149Q8NC42 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RNF149Q8NC42 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.95■■□□□ 1.58
RNF149Q8NC42 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RNF149Q8NC42 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RNF149Q8NC42 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
RNF149Q8NC42 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.94■■□□□ 1.58
RNF149Q8NC42 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RNF149Q8NC42 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RNF149Q8NC42 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.94■■□□□ 1.58
RNF149Q8NC42 PBX2P1-201ENST00000493219 1291 ntBASIC24.94■■□□□ 1.58
RNF149Q8NC42 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RNF149Q8NC42 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RNF149Q8NC42 AC099791.2-201ENST00000605725 427 ntBASIC24.94■■□□□ 1.58
RNF149Q8NC42 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.94■■□□□ 1.58
RNF149Q8NC42 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RNF149Q8NC42 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.93■■□□□ 1.58
RNF149Q8NC42 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF149Q8NC42 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.93■■□□□ 1.58
RNF149Q8NC42 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF149Q8NC42 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.93■■□□□ 1.58
RNF149Q8NC42 AL136162.1-201ENST00000607711 1078 ntBASIC24.93■■□□□ 1.58
RNF149Q8NC42 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RNF149Q8NC42 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF149Q8NC42 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RNF149Q8NC42 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
RNF149Q8NC42 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RNF149Q8NC42 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RNF149Q8NC42 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RNF149Q8NC42 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RNF149Q8NC42 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RNF149Q8NC42 AC092171.4-201ENST00000609130 632 ntBASIC24.92■■□□□ 1.58
RNF149Q8NC42 AC106739.1-201ENST00000617035 715 ntBASIC24.92■■□□□ 1.58
RNF149Q8NC42 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.92■■□□□ 1.58
RNF149Q8NC42 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.92■■□□□ 1.58
RNF149Q8NC42 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RNF149Q8NC42 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
RNF149Q8NC42 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RNF149Q8NC42 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
RNF149Q8NC42 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RNF149Q8NC42 AC004812.2-201ENST00000611079 2094 ntBASIC24.91■■□□□ 1.58
RNF149Q8NC42 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24.91■■□□□ 1.58
RNF149Q8NC42 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RNF149Q8NC42 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
RNF149Q8NC42 DUX4L19-201ENST00000557448 1267 ntBASIC24.91■■□□□ 1.58
RNF149Q8NC42 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.91■■□□□ 1.58
RNF149Q8NC42 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.91■■□□□ 1.58
RNF149Q8NC42 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF149Q8NC42 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF149Q8NC42 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
RNF149Q8NC42 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF149Q8NC42 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.9■■□□□ 1.58
RNF149Q8NC42 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.9■■□□□ 1.58
RNF149Q8NC42 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
RNF149Q8NC42 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
RNF149Q8NC42 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
RNF149Q8NC42 AC135279.3-201ENST00000610945 1311 ntBASIC24.89■■□□□ 1.58
RNF149Q8NC42 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
RNF149Q8NC42 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
RNF149Q8NC42 SYT6-210ENST00000641643 1587 ntBASIC24.89■■□□□ 1.58
RNF149Q8NC42 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RNF149Q8NC42 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RNF149Q8NC42 AC133561.4-201ENST00000566112 224 ntBASIC24.89■■□□□ 1.58
RNF149Q8NC42 AC005837.3-201ENST00000612163 286 ntBASIC24.89■■□□□ 1.58
RNF149Q8NC42 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RNF149Q8NC42 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
RNF149Q8NC42 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RNF149Q8NC42 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
RNF149Q8NC42 AC024257.2-201ENST00000549699 147 ntBASIC24.88■■□□□ 1.57
RNF149Q8NC42 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms