Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C3orf56Q8N813 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C3orf56Q8N813 MIR572-201ENST00000384983 95 ntBASIC17.75■□□□□ 0.43
C3orf56Q8N813 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.75■□□□□ 0.43
C3orf56Q8N813 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C3orf56Q8N813 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
C3orf56Q8N813 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.75■□□□□ 0.43
C3orf56Q8N813 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.75■□□□□ 0.43
C3orf56Q8N813 pRNA.6-201ENST00000610482 90 ntBASIC17.75■□□□□ 0.43
C3orf56Q8N813 pRNA.5-201ENST00000612139 90 ntBASIC17.75■□□□□ 0.43
C3orf56Q8N813 pRNA.11-201ENST00000618423 90 ntBASIC17.75■□□□□ 0.43
C3orf56Q8N813 pRNA.13-201ENST00000619112 90 ntBASIC17.75■□□□□ 0.43
C3orf56Q8N813 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C3orf56Q8N813 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
C3orf56Q8N813 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
C3orf56Q8N813 LINC02228-203ENST00000641970 1355 ntBASIC17.75■□□□□ 0.43
C3orf56Q8N813 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
C3orf56Q8N813 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C3orf56Q8N813 AC131274.2-201ENST00000580697 1507 ntBASIC17.74■□□□□ 0.43
C3orf56Q8N813 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C3orf56Q8N813 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C3orf56Q8N813 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C3orf56Q8N813 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
C3orf56Q8N813 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.74■□□□□ 0.43
C3orf56Q8N813 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
C3orf56Q8N813 IGHV3-19-201ENST00000521488 291 ntBASIC17.74■□□□□ 0.43
C3orf56Q8N813 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.74■□□□□ 0.43
C3orf56Q8N813 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
C3orf56Q8N813 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.74■□□□□ 0.43
C3orf56Q8N813 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
C3orf56Q8N813 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC17.74■□□□□ 0.43
C3orf56Q8N813 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C3orf56Q8N813 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C3orf56Q8N813 ESRRAP2-201ENST00000418437 1549 ntBASIC17.73■□□□□ 0.43
C3orf56Q8N813 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
C3orf56Q8N813 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC17.73■□□□□ 0.43
C3orf56Q8N813 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
C3orf56Q8N813 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.73■□□□□ 0.43
C3orf56Q8N813 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.73■□□□□ 0.43
C3orf56Q8N813 AC080038.1-201ENST00000611274 1154 ntBASIC17.73■□□□□ 0.43
C3orf56Q8N813 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.73■□□□□ 0.43
C3orf56Q8N813 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
C3orf56Q8N813 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
C3orf56Q8N813 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C3orf56Q8N813 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
C3orf56Q8N813 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.73■□□□□ 0.43
C3orf56Q8N813 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C3orf56Q8N813 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
C3orf56Q8N813 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C3orf56Q8N813 AC016769.1-201ENST00000409132 1010 ntBASIC17.72■□□□□ 0.43
C3orf56Q8N813 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.72■□□□□ 0.43
C3orf56Q8N813 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.72■□□□□ 0.43
C3orf56Q8N813 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.72■□□□□ 0.43
C3orf56Q8N813 AL022069.1-201ENST00000568025 1636 ntBASIC17.72■□□□□ 0.43
C3orf56Q8N813 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
C3orf56Q8N813 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
C3orf56Q8N813 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
C3orf56Q8N813 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.71■□□□□ 0.43
C3orf56Q8N813 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.71■□□□□ 0.43
C3orf56Q8N813 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
C3orf56Q8N813 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.71■□□□□ 0.43
C3orf56Q8N813 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.71■□□□□ 0.43
C3orf56Q8N813 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
C3orf56Q8N813 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
C3orf56Q8N813 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C3orf56Q8N813 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
C3orf56Q8N813 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C3orf56Q8N813 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
C3orf56Q8N813 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
C3orf56Q8N813 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C3orf56Q8N813 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C3orf56Q8N813 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.7■□□□□ 0.42
C3orf56Q8N813 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
C3orf56Q8N813 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
C3orf56Q8N813 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
C3orf56Q8N813 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
C3orf56Q8N813 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.7■□□□□ 0.42
C3orf56Q8N813 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
C3orf56Q8N813 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.7■□□□□ 0.42
C3orf56Q8N813 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
C3orf56Q8N813 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.7■□□□□ 0.42
C3orf56Q8N813 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
C3orf56Q8N813 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
C3orf56Q8N813 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C3orf56Q8N813 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.69■□□□□ 0.42
C3orf56Q8N813 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C3orf56Q8N813 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C3orf56Q8N813 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.69■□□□□ 0.42
C3orf56Q8N813 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C3orf56Q8N813 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.69■□□□□ 0.42
C3orf56Q8N813 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.69■□□□□ 0.42
C3orf56Q8N813 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C3orf56Q8N813 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C3orf56Q8N813 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.68■□□□□ 0.42
C3orf56Q8N813 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.68■□□□□ 0.42
C3orf56Q8N813 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C3orf56Q8N813 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
C3orf56Q8N813 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.68■□□□□ 0.42
C3orf56Q8N813 ABHD17AP1-201ENST00000358206 933 ntBASIC17.68■□□□□ 0.42
C3orf56Q8N813 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms