Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01561Q8N1V8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01561Q8N1V8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LINC01561Q8N1V8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC01561Q8N1V8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01561Q8N1V8 LONRF2P2-201ENST00000439212 571 ntBASIC15.2■□□□□ 0.02
LINC01561Q8N1V8 AC022616.5-201ENST00000518796 181 ntBASIC15.2■□□□□ 0.02
LINC01561Q8N1V8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01561Q8N1V8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01561Q8N1V8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01561Q8N1V8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01561Q8N1V8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC01561Q8N1V8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LINC01561Q8N1V8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC01561Q8N1V8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LINC01561Q8N1V8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LINC01561Q8N1V8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LINC01561Q8N1V8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 AL592293.1-201ENST00000502889 1188 ntBASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC01561Q8N1V8 LINC00526-201ENST00000581067 1875 ntBASIC15.18■□□□□ 0.02
LINC01561Q8N1V8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01561Q8N1V8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01561Q8N1V8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01561Q8N1V8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01561Q8N1V8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01561Q8N1V8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01561Q8N1V8 AL024507.2-201ENST00000606070 2574 ntBASIC15.18■□□□□ 0.02
LINC01561Q8N1V8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
LINC01561Q8N1V8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01561Q8N1V8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01561Q8N1V8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC15.18■□□□□ 0.02
LINC01561Q8N1V8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01561Q8N1V8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
LINC01561Q8N1V8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
LINC01561Q8N1V8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.18■□□□□ 0.02
LINC01561Q8N1V8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LINC01561Q8N1V8 AC131274.2-201ENST00000580697 1507 ntBASIC15.17■□□□□ 0.02
LINC01561Q8N1V8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LINC01561Q8N1V8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LINC01561Q8N1V8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01561Q8N1V8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01561Q8N1V8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01561Q8N1V8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LINC01561Q8N1V8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC15.17■□□□□ 0.02
LINC01561Q8N1V8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01561Q8N1V8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01561Q8N1V8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC01561Q8N1V8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.17■□□□□ 0.02
LINC01561Q8N1V8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LINC01561Q8N1V8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01561Q8N1V8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01561Q8N1V8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01561Q8N1V8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01561Q8N1V8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01561Q8N1V8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01561Q8N1V8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LINC01561Q8N1V8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC01561Q8N1V8 SPCS2P3-201ENST00000500401 656 ntBASIC15.16■□□□□ 0.02
LINC01561Q8N1V8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01561Q8N1V8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01561Q8N1V8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01561Q8N1V8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01561Q8N1V8 GUSBP5-202ENST00000510805 1989 ntBASIC15.16■□□□□ 0.02
LINC01561Q8N1V8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.16■□□□□ 0.02
LINC01561Q8N1V8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC01561Q8N1V8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LINC01561Q8N1V8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01561Q8N1V8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01561Q8N1V8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01561Q8N1V8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01561Q8N1V8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01561Q8N1V8 HYI-210ENST00000486909 905 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC01561Q8N1V8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01561Q8N1V8 AC019171.1-201ENST00000601251 1056 ntBASIC15.15■□□□□ 0.02
LINC01561Q8N1V8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01561Q8N1V8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC01561Q8N1V8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01561Q8N1V8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01561Q8N1V8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
LINC01561Q8N1V8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms