Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CHPFQ8IZ52 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.12■■□□□ 1.29
CHPFQ8IZ52 AL161729.1-201ENST00000604104 1402 ntBASIC23.12■■□□□ 1.29
CHPFQ8IZ52 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHPFQ8IZ52 C17orf82-201ENST00000623772 1530 ntBASIC23.12■■□□□ 1.29
CHPFQ8IZ52 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CHPFQ8IZ52 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHPFQ8IZ52 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHPFQ8IZ52 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.11■■□□□ 1.29
CHPFQ8IZ52 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.11■■□□□ 1.29
CHPFQ8IZ52 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHPFQ8IZ52 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHPFQ8IZ52 AC091305.1-201ENST00000479476 895 ntBASIC23.11■■□□□ 1.29
CHPFQ8IZ52 AC241377.3-202ENST00000626088 1088 ntBASIC23.11■■□□□ 1.29
CHPFQ8IZ52 AC241585.3-202ENST00000628937 1088 ntBASIC23.11■■□□□ 1.29
CHPFQ8IZ52 AC245100.8-202ENST00000629247 1058 ntBASIC23.11■■□□□ 1.29
CHPFQ8IZ52 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CHPFQ8IZ52 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHPFQ8IZ52 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHPFQ8IZ52 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHPFQ8IZ52 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CHPFQ8IZ52 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CHPFQ8IZ52 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.1■■□□□ 1.29
CHPFQ8IZ52 AL138724.1-201ENST00000606771 1088 ntBASIC23.1■■□□□ 1.29
CHPFQ8IZ52 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.1■■□□□ 1.29
CHPFQ8IZ52 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHPFQ8IZ52 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHPFQ8IZ52 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHPFQ8IZ52 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
CHPFQ8IZ52 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
CHPFQ8IZ52 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.09■■□□□ 1.29
CHPFQ8IZ52 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHPFQ8IZ52 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHPFQ8IZ52 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CHPFQ8IZ52 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHPFQ8IZ52 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.09■■□□□ 1.29
CHPFQ8IZ52 AC011298.3-201ENST00000615796 283 ntBASIC23.09■■□□□ 1.29
CHPFQ8IZ52 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHPFQ8IZ52 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CHPFQ8IZ52 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CHPFQ8IZ52 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CHPFQ8IZ52 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CHPFQ8IZ52 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
CHPFQ8IZ52 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.08■■□□□ 1.29
CHPFQ8IZ52 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CHPFQ8IZ52 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.08■■□□□ 1.29
CHPFQ8IZ52 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.08■■□□□ 1.29
CHPFQ8IZ52 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CHPFQ8IZ52 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHPFQ8IZ52 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.08■■□□□ 1.29
CHPFQ8IZ52 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
CHPFQ8IZ52 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHPFQ8IZ52 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHPFQ8IZ52 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CHPFQ8IZ52 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CHPFQ8IZ52 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.28
CHPFQ8IZ52 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CHPFQ8IZ52 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CHPFQ8IZ52 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHPFQ8IZ52 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.07■■□□□ 1.28
CHPFQ8IZ52 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHPFQ8IZ52 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHPFQ8IZ52 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHPFQ8IZ52 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHPFQ8IZ52 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CHPFQ8IZ52 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHPFQ8IZ52 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CHPFQ8IZ52 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHPFQ8IZ52 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHPFQ8IZ52 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.06■■□□□ 1.28
CHPFQ8IZ52 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.06■■□□□ 1.28
CHPFQ8IZ52 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CHPFQ8IZ52 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.06■■□□□ 1.28
CHPFQ8IZ52 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CHPFQ8IZ52 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.06■■□□□ 1.28
CHPFQ8IZ52 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CHPFQ8IZ52 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHPFQ8IZ52 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHPFQ8IZ52 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.05■■□□□ 1.28
CHPFQ8IZ52 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.05■■□□□ 1.28
CHPFQ8IZ52 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.05■■□□□ 1.28
CHPFQ8IZ52 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHPFQ8IZ52 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
CHPFQ8IZ52 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHPFQ8IZ52 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CHPFQ8IZ52 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.05■■□□□ 1.28
CHPFQ8IZ52 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.05■■□□□ 1.28
CHPFQ8IZ52 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CHPFQ8IZ52 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHPFQ8IZ52 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHPFQ8IZ52 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHPFQ8IZ52 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHPFQ8IZ52 RASA4CP-201ENST00000424092 1398 ntBASIC23.04■■□□□ 1.28
CHPFQ8IZ52 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHPFQ8IZ52 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.04■■□□□ 1.28
CHPFQ8IZ52 AC027682.1-201ENST00000562846 899 ntBASIC23.04■■□□□ 1.28
CHPFQ8IZ52 AC008764.7-201ENST00000593779 1081 ntBASIC23.04■■□□□ 1.28
CHPFQ8IZ52 AC009086.3-201ENST00000623486 1008 ntBASIC23.04■■□□□ 1.28
CHPFQ8IZ52 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHPFQ8IZ52 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms