Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC44A2Q8IWA5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC44A2Q8IWA5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC44A2Q8IWA5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC44A2Q8IWA5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.42■■□□□ 1.02
SLC44A2Q8IWA5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.42■■□□□ 1.02
SLC44A2Q8IWA5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.42■■□□□ 1.02
SLC44A2Q8IWA5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.42■■□□□ 1.02
SLC44A2Q8IWA5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC44A2Q8IWA5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.41■■□□□ 1.02
SLC44A2Q8IWA5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC44A2Q8IWA5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC44A2Q8IWA5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC44A2Q8IWA5 AF131216.4-201ENST00000638924 1588 ntBASIC21.41■■□□□ 1.02
SLC44A2Q8IWA5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC44A2Q8IWA5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC44A2Q8IWA5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC44A2Q8IWA5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.41■■□□□ 1.02
SLC44A2Q8IWA5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.41■■□□□ 1.02
SLC44A2Q8IWA5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.41■■□□□ 1.02
SLC44A2Q8IWA5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC44A2Q8IWA5 AC079834.2-201ENST00000609776 1949 ntBASIC21.41■■□□□ 1.02
SLC44A2Q8IWA5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC44A2Q8IWA5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SLC44A2Q8IWA5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SLC44A2Q8IWA5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC44A2Q8IWA5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC44A2Q8IWA5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
SLC44A2Q8IWA5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SLC44A2Q8IWA5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC44A2Q8IWA5 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.4■■□□□ 1.02
SLC44A2Q8IWA5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
SLC44A2Q8IWA5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC44A2Q8IWA5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC44A2Q8IWA5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.4■■□□□ 1.02
SLC44A2Q8IWA5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SLC44A2Q8IWA5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SLC44A2Q8IWA5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SLC44A2Q8IWA5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC44A2Q8IWA5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
SLC44A2Q8IWA5 C9orf163-202ENST00000624034 2573 ntBASIC21.39■■□□□ 1.01
SLC44A2Q8IWA5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SLC44A2Q8IWA5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC44A2Q8IWA5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC44A2Q8IWA5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC44A2Q8IWA5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SLC44A2Q8IWA5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SLC44A2Q8IWA5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC44A2Q8IWA5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.38■■□□□ 1.01
SLC44A2Q8IWA5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC44A2Q8IWA5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC44A2Q8IWA5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
SLC44A2Q8IWA5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC44A2Q8IWA5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
SLC44A2Q8IWA5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC44A2Q8IWA5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC44A2Q8IWA5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC44A2Q8IWA5 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SLC44A2Q8IWA5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC44A2Q8IWA5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC44A2Q8IWA5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC44A2Q8IWA5 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.37■■□□□ 1.01
SLC44A2Q8IWA5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC44A2Q8IWA5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC44A2Q8IWA5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.37■■□□□ 1.01
SLC44A2Q8IWA5 AL022069.1-201ENST00000568025 1636 ntBASIC21.37■■□□□ 1.01
SLC44A2Q8IWA5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 AC137630.3-201ENST00000607245 391 ntBASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC44A2Q8IWA5 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.35■■□□□ 1.01
SLC44A2Q8IWA5 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SLC44A2Q8IWA5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC44A2Q8IWA5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.35■■□□□ 1.01
SLC44A2Q8IWA5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.35■■□□□ 1.01
SLC44A2Q8IWA5 AL451085.2-201ENST00000605085 799 ntBASIC21.35■■□□□ 1.01
SLC44A2Q8IWA5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC44A2Q8IWA5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.35■■□□□ 1.01
SLC44A2Q8IWA5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SLC44A2Q8IWA5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC44A2Q8IWA5 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.35■■□□□ 1.01
SLC44A2Q8IWA5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC44A2Q8IWA5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC44A2Q8IWA5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC44A2Q8IWA5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms