Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF546Q86UE3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF546Q86UE3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF546Q86UE3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF546Q86UE3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF546Q86UE3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF546Q86UE3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF546Q86UE3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF546Q86UE3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ZNF546Q86UE3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF546Q86UE3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF546Q86UE3 AL121603.2-201ENST00000557373 2117 ntBASIC18.8■□□□□ 0.6
ZNF546Q86UE3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF546Q86UE3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF546Q86UE3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF546Q86UE3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ZNF546Q86UE3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF546Q86UE3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF546Q86UE3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF546Q86UE3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF546Q86UE3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF546Q86UE3 LINC01971-201ENST00000617888 1048 ntBASIC18.79■□□□□ 0.6
ZNF546Q86UE3 AC148477.6-201ENST00000623746 465 ntBASIC18.79■□□□□ 0.6
ZNF546Q86UE3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF546Q86UE3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
ZNF546Q86UE3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
ZNF546Q86UE3 MIR219A2-201ENST00000608502 1504 ntBASIC18.79■□□□□ 0.6
ZNF546Q86UE3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF546Q86UE3 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF546Q86UE3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF546Q86UE3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF546Q86UE3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF546Q86UE3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.78■□□□□ 0.6
ZNF546Q86UE3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ZNF546Q86UE3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF546Q86UE3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF546Q86UE3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF546Q86UE3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF546Q86UE3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF546Q86UE3 AL359258.2-201ENST00000564063 1566 ntBASIC18.77■□□□□ 0.6
ZNF546Q86UE3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF546Q86UE3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF546Q86UE3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ZNF546Q86UE3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF546Q86UE3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF546Q86UE3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF546Q86UE3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF546Q86UE3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF546Q86UE3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ZNF546Q86UE3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF546Q86UE3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
ZNF546Q86UE3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.77■□□□□ 0.59
ZNF546Q86UE3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF546Q86UE3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
ZNF546Q86UE3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
ZNF546Q86UE3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF546Q86UE3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF546Q86UE3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ZNF546Q86UE3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF546Q86UE3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF546Q86UE3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF546Q86UE3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF546Q86UE3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ZNF546Q86UE3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF546Q86UE3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.76■□□□□ 0.59
ZNF546Q86UE3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ZNF546Q86UE3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.76■□□□□ 0.59
ZNF546Q86UE3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF546Q86UE3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ZNF546Q86UE3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF546Q86UE3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF546Q86UE3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF546Q86UE3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF546Q86UE3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF546Q86UE3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.75■□□□□ 0.59
ZNF546Q86UE3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF546Q86UE3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF546Q86UE3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF546Q86UE3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF546Q86UE3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF546Q86UE3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF546Q86UE3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ZNF546Q86UE3 DUX4L13-201ENST00000554103 1267 ntBASIC18.74■□□□□ 0.59
ZNF546Q86UE3 DUX4L15-201ENST00000611059 1267 ntBASIC18.74■□□□□ 0.59
ZNF546Q86UE3 DUX4L23-201ENST00000615195 1269 ntBASIC18.74■□□□□ 0.59
ZNF546Q86UE3 DUX4L24-201ENST00000617576 1269 ntBASIC18.74■□□□□ 0.59
ZNF546Q86UE3 DUX4L22-201ENST00000618238 1269 ntBASIC18.74■□□□□ 0.59
ZNF546Q86UE3 DUX4L20-201ENST00000619712 1269 ntBASIC18.74■□□□□ 0.59
ZNF546Q86UE3 DUX4L21-201ENST00000622058 1269 ntBASIC18.74■□□□□ 0.59
ZNF546Q86UE3 DUX4L10-201ENST00000622460 1267 ntBASIC18.74■□□□□ 0.59
ZNF546Q86UE3 DUX4L25-201ENST00000624915 1269 ntBASIC18.74■□□□□ 0.59
ZNF546Q86UE3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.74■□□□□ 0.59
ZNF546Q86UE3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF546Q86UE3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF546Q86UE3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF546Q86UE3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ZNF546Q86UE3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF546Q86UE3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF546Q86UE3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ZNF546Q86UE3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms