Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13BQ7Z7G8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.18□□□□□ -0.14
VPS13BQ7Z7G8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.18□□□□□ -0.14
VPS13BQ7Z7G8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
VPS13BQ7Z7G8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13BQ7Z7G8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
VPS13BQ7Z7G8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13BQ7Z7G8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.18□□□□□ -0.14
VPS13BQ7Z7G8 TERF1P2-201ENST00000583350 1212 ntBASIC14.18□□□□□ -0.14
VPS13BQ7Z7G8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13BQ7Z7G8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13BQ7Z7G8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.17□□□□□ -0.14
VPS13BQ7Z7G8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.17□□□□□ -0.14
VPS13BQ7Z7G8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13BQ7Z7G8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13BQ7Z7G8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC14.17□□□□□ -0.14
VPS13BQ7Z7G8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13BQ7Z7G8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13BQ7Z7G8 KRT18P61-201ENST00000585825 1298 ntBASIC14.17□□□□□ -0.14
VPS13BQ7Z7G8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VPS13BQ7Z7G8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC14.17□□□□□ -0.14
VPS13BQ7Z7G8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13BQ7Z7G8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13BQ7Z7G8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VPS13BQ7Z7G8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13BQ7Z7G8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13BQ7Z7G8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13BQ7Z7G8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.16□□□□□ -0.14
VPS13BQ7Z7G8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13BQ7Z7G8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13BQ7Z7G8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VPS13BQ7Z7G8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
VPS13BQ7Z7G8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.16□□□□□ -0.14
VPS13BQ7Z7G8 DUSP8P4-201ENST00000399538 1761 ntBASIC14.16□□□□□ -0.14
VPS13BQ7Z7G8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VPS13BQ7Z7G8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.16□□□□□ -0.14
VPS13BQ7Z7G8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VPS13BQ7Z7G8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC14.16□□□□□ -0.14
VPS13BQ7Z7G8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13BQ7Z7G8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13BQ7Z7G8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
VPS13BQ7Z7G8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13BQ7Z7G8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13BQ7Z7G8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.15□□□□□ -0.14
VPS13BQ7Z7G8 AC099791.2-201ENST00000605725 427 ntBASIC14.15□□□□□ -0.14
VPS13BQ7Z7G8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC14.15□□□□□ -0.14
VPS13BQ7Z7G8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VPS13BQ7Z7G8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13BQ7Z7G8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VPS13BQ7Z7G8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.15□□□□□ -0.14
VPS13BQ7Z7G8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.15□□□□□ -0.14
VPS13BQ7Z7G8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC14.15□□□□□ -0.14
VPS13BQ7Z7G8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS13BQ7Z7G8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.14□□□□□ -0.15
VPS13BQ7Z7G8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS13BQ7Z7G8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC14.14□□□□□ -0.15
VPS13BQ7Z7G8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS13BQ7Z7G8 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.14□□□□□ -0.15
VPS13BQ7Z7G8 CDCA4P2-201ENST00000441182 718 ntBASIC14.14□□□□□ -0.15
VPS13BQ7Z7G8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS13BQ7Z7G8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS13BQ7Z7G8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VPS13BQ7Z7G8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS13BQ7Z7G8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.14□□□□□ -0.15
VPS13BQ7Z7G8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
VPS13BQ7Z7G8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VPS13BQ7Z7G8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC14.14□□□□□ -0.15
VPS13BQ7Z7G8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
VPS13BQ7Z7G8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13BQ7Z7G8 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.13□□□□□ -0.15
VPS13BQ7Z7G8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
VPS13BQ7Z7G8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VPS13BQ7Z7G8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13BQ7Z7G8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13BQ7Z7G8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS13BQ7Z7G8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS13BQ7Z7G8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS13BQ7Z7G8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13BQ7Z7G8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13BQ7Z7G8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13BQ7Z7G8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC14.13□□□□□ -0.15
VPS13BQ7Z7G8 KRT18P14-201ENST00000534205 1250 ntBASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 AC104771.1-201ENST00000603335 964 ntBASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms