Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MRPL55Q7Z7F7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MRPL55Q7Z7F7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
MRPL55Q7Z7F7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MRPL55Q7Z7F7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
MRPL55Q7Z7F7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MRPL55Q7Z7F7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
MRPL55Q7Z7F7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC14.49□□□□□ -0.09
MRPL55Q7Z7F7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC14.49□□□□□ -0.09
MRPL55Q7Z7F7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
MRPL55Q7Z7F7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
MRPL55Q7Z7F7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MRPL55Q7Z7F7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MRPL55Q7Z7F7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
MRPL55Q7Z7F7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
MRPL55Q7Z7F7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
MRPL55Q7Z7F7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC14.48□□□□□ -0.09
MRPL55Q7Z7F7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MRPL55Q7Z7F7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC14.48□□□□□ -0.09
MRPL55Q7Z7F7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MRPL55Q7Z7F7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MRPL55Q7Z7F7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MRPL55Q7Z7F7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MRPL55Q7Z7F7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MRPL55Q7Z7F7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC14.48□□□□□ -0.09
MRPL55Q7Z7F7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC14.48□□□□□ -0.09
MRPL55Q7Z7F7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC14.48□□□□□ -0.09
MRPL55Q7Z7F7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MRPL55Q7Z7F7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
MRPL55Q7Z7F7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MRPL55Q7Z7F7 AC012676.1-201ENST00000574705 1949 ntBASIC14.48□□□□□ -0.09
MRPL55Q7Z7F7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MRPL55Q7Z7F7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 ATP5G2P3-201ENST00000429083 425 ntBASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MRPL55Q7Z7F7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MRPL55Q7Z7F7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC14.46□□□□□ -0.09
MRPL55Q7Z7F7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MRPL55Q7Z7F7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
MRPL55Q7Z7F7 AC138932.1-201ENST00000534164 6830 ntBASIC14.46□□□□□ -0.09
MRPL55Q7Z7F7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MRPL55Q7Z7F7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MRPL55Q7Z7F7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MRPL55Q7Z7F7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MRPL55Q7Z7F7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MRPL55Q7Z7F7 AC004987.1-201ENST00000428627 508 ntBASIC14.46□□□□□ -0.09
MRPL55Q7Z7F7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC14.46□□□□□ -0.09
MRPL55Q7Z7F7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
MRPL55Q7Z7F7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
MRPL55Q7Z7F7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC14.46□□□□□ -0.1
MRPL55Q7Z7F7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
MRPL55Q7Z7F7 NFE2L3P1-201ENST00000588207 1959 ntBASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 TSPY13P-201ENST00000338964 914 ntBASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 THA1P-201ENST00000590384 1145 ntBASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MRPL55Q7Z7F7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
MRPL55Q7Z7F7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms