Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
UBE3BQ7Z3V4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
UBE3BQ7Z3V4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
UBE3BQ7Z3V4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC28.49■■■□□ 2.15
UBE3BQ7Z3V4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC28.49■■■□□ 2.15
UBE3BQ7Z3V4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC28.49■■■□□ 2.15
UBE3BQ7Z3V4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
UBE3BQ7Z3V4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC28.49■■■□□ 2.15
UBE3BQ7Z3V4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
UBE3BQ7Z3V4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
UBE3BQ7Z3V4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.47■■■□□ 2.15
UBE3BQ7Z3V4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
UBE3BQ7Z3V4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC28.47■■■□□ 2.15
UBE3BQ7Z3V4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
UBE3BQ7Z3V4 AL031432.3-201ENST00000607698 485 ntBASIC28.47■■■□□ 2.15
UBE3BQ7Z3V4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC28.47■■■□□ 2.15
UBE3BQ7Z3V4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
UBE3BQ7Z3V4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
UBE3BQ7Z3V4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
UBE3BQ7Z3V4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
UBE3BQ7Z3V4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC28.46■■■□□ 2.15
UBE3BQ7Z3V4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC28.46■■■□□ 2.15
UBE3BQ7Z3V4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC28.46■■■□□ 2.15
UBE3BQ7Z3V4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC28.46■■■□□ 2.15
UBE3BQ7Z3V4 SYT6-210ENST00000641643 1587 ntBASIC28.45■■■□□ 2.15
UBE3BQ7Z3V4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
UBE3BQ7Z3V4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC28.45■■■□□ 2.15
UBE3BQ7Z3V4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC28.45■■■□□ 2.14
UBE3BQ7Z3V4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC28.45■■■□□ 2.14
UBE3BQ7Z3V4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC28.45■■■□□ 2.14
UBE3BQ7Z3V4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
UBE3BQ7Z3V4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
UBE3BQ7Z3V4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
UBE3BQ7Z3V4 SERBP1P1-201ENST00000396021 1160 ntBASIC28.44■■■□□ 2.14
UBE3BQ7Z3V4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
UBE3BQ7Z3V4 DUX4L19-201ENST00000557448 1267 ntBASIC28.44■■■□□ 2.14
UBE3BQ7Z3V4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
UBE3BQ7Z3V4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
UBE3BQ7Z3V4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC28.43■■■□□ 2.14
UBE3BQ7Z3V4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.43■■■□□ 2.14
UBE3BQ7Z3V4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
UBE3BQ7Z3V4 AC092171.4-201ENST00000609130 632 ntBASIC28.43■■■□□ 2.14
UBE3BQ7Z3V4 SF1-220ENST00000626028 704 ntTSL 2 BASIC28.43■■■□□ 2.14
UBE3BQ7Z3V4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC28.43■■■□□ 2.14
UBE3BQ7Z3V4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
UBE3BQ7Z3V4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
UBE3BQ7Z3V4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
UBE3BQ7Z3V4 AC006455.2-201ENST00000429931 906 ntBASIC28.42■■■□□ 2.14
UBE3BQ7Z3V4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC28.42■■■□□ 2.14
UBE3BQ7Z3V4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
UBE3BQ7Z3V4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
UBE3BQ7Z3V4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
UBE3BQ7Z3V4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
UBE3BQ7Z3V4 PTCHD3P2-201ENST00000424937 1205 ntBASIC28.41■■■□□ 2.14
UBE3BQ7Z3V4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
UBE3BQ7Z3V4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
UBE3BQ7Z3V4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
UBE3BQ7Z3V4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
UBE3BQ7Z3V4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
UBE3BQ7Z3V4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
UBE3BQ7Z3V4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC28.4■■■□□ 2.14
UBE3BQ7Z3V4 SUDS3P1-201ENST00000505831 966 ntBASIC28.4■■■□□ 2.14
UBE3BQ7Z3V4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
UBE3BQ7Z3V4 LINC01124-201ENST00000409786 2117 ntBASIC28.4■■■□□ 2.14
UBE3BQ7Z3V4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.4■■■□□ 2.14
UBE3BQ7Z3V4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
UBE3BQ7Z3V4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
UBE3BQ7Z3V4 AC142381.2-201ENST00000566120 298 ntBASIC28.39■■■□□ 2.14
UBE3BQ7Z3V4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.39■■■□□ 2.13
UBE3BQ7Z3V4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC28.38■■■□□ 2.13
UBE3BQ7Z3V4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC28.38■■■□□ 2.13
UBE3BQ7Z3V4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
UBE3BQ7Z3V4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
UBE3BQ7Z3V4 EDA-201ENST00000338901 1233 ntBASIC28.38■■■□□ 2.13
UBE3BQ7Z3V4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
UBE3BQ7Z3V4 MIR935-201ENST00000401179 91 ntBASIC28.38■■■□□ 2.13
UBE3BQ7Z3V4 AC241377.3-202ENST00000626088 1088 ntBASIC28.38■■■□□ 2.13
UBE3BQ7Z3V4 AC241585.3-202ENST00000628937 1088 ntBASIC28.38■■■□□ 2.13
UBE3BQ7Z3V4 AC245100.8-202ENST00000629247 1058 ntBASIC28.38■■■□□ 2.13
UBE3BQ7Z3V4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC28.38■■■□□ 2.13
UBE3BQ7Z3V4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC28.38■■■□□ 2.13
UBE3BQ7Z3V4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
UBE3BQ7Z3V4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
UBE3BQ7Z3V4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
UBE3BQ7Z3V4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
UBE3BQ7Z3V4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
UBE3BQ7Z3V4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
UBE3BQ7Z3V4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.37■■■□□ 2.13
UBE3BQ7Z3V4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC28.37■■■□□ 2.13
UBE3BQ7Z3V4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
UBE3BQ7Z3V4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
UBE3BQ7Z3V4 AL139125.2-201ENST00000623134 1869 ntBASIC28.37■■■□□ 2.13
UBE3BQ7Z3V4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
UBE3BQ7Z3V4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
UBE3BQ7Z3V4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
UBE3BQ7Z3V4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
UBE3BQ7Z3V4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
UBE3BQ7Z3V4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC28.36■■■□□ 2.13
UBE3BQ7Z3V4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC28.36■■■□□ 2.13
UBE3BQ7Z3V4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms