Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.14■□□□□ 0.97
RTL4Q6ZR62 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.14■□□□□ 0.97
RTL4Q6ZR62 MIR3621-201ENST00000580529 85 ntBASIC21.14■□□□□ 0.97
RTL4Q6ZR62 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.14■□□□□ 0.97
RTL4Q6ZR62 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.14■□□□□ 0.97
RTL4Q6ZR62 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTL4Q6ZR62 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTL4Q6ZR62 AL022069.1-201ENST00000568025 1636 ntBASIC21.14■□□□□ 0.97
RTL4Q6ZR62 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RTL4Q6ZR62 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.14■□□□□ 0.97
RTL4Q6ZR62 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RTL4Q6ZR62 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.14■□□□□ 0.97
RTL4Q6ZR62 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTL4Q6ZR62 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.13■□□□□ 0.97
RTL4Q6ZR62 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.13■□□□□ 0.97
RTL4Q6ZR62 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTL4Q6ZR62 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTL4Q6ZR62 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTL4Q6ZR62 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTL4Q6ZR62 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTL4Q6ZR62 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.13■□□□□ 0.97
RTL4Q6ZR62 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTL4Q6ZR62 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RTL4Q6ZR62 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RTL4Q6ZR62 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.13■□□□□ 0.97
RTL4Q6ZR62 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
RTL4Q6ZR62 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTL4Q6ZR62 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTL4Q6ZR62 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.12■□□□□ 0.97
RTL4Q6ZR62 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
RTL4Q6ZR62 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTL4Q6ZR62 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.12■□□□□ 0.97
RTL4Q6ZR62 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RTL4Q6ZR62 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RTL4Q6ZR62 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RTL4Q6ZR62 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTL4Q6ZR62 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RTL4Q6ZR62 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.11■□□□□ 0.97
RTL4Q6ZR62 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTL4Q6ZR62 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.11■□□□□ 0.97
RTL4Q6ZR62 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.11■□□□□ 0.97
RTL4Q6ZR62 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTL4Q6ZR62 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTL4Q6ZR62 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RTL4Q6ZR62 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTL4Q6ZR62 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTL4Q6ZR62 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RTL4Q6ZR62 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTL4Q6ZR62 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTL4Q6ZR62 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTL4Q6ZR62 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.1■□□□□ 0.97
RTL4Q6ZR62 HLA-L-211ENST00000482052 1765 ntBASIC21.1■□□□□ 0.97
RTL4Q6ZR62 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RTL4Q6ZR62 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL4Q6ZR62 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL4Q6ZR62 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL4Q6ZR62 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RTL4Q6ZR62 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTL4Q6ZR62 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.09■□□□□ 0.97
RTL4Q6ZR62 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTL4Q6ZR62 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTL4Q6ZR62 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL4Q6ZR62 AC004812.2-201ENST00000611079 2094 ntBASIC21.09■□□□□ 0.97
RTL4Q6ZR62 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTL4Q6ZR62 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RTL4Q6ZR62 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.08■□□□□ 0.97
RTL4Q6ZR62 AL161729.1-201ENST00000604104 1402 ntBASIC21.08■□□□□ 0.97
RTL4Q6ZR62 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.08■□□□□ 0.97
RTL4Q6ZR62 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.08■□□□□ 0.96
RTL4Q6ZR62 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTL4Q6ZR62 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RTL4Q6ZR62 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTL4Q6ZR62 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.07■□□□□ 0.96
RTL4Q6ZR62 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.07■□□□□ 0.96
RTL4Q6ZR62 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RTL4Q6ZR62 AC131281.2-201ENST00000520478 145 ntBASIC21.07■□□□□ 0.96
RTL4Q6ZR62 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.07■□□□□ 0.96
RTL4Q6ZR62 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RTL4Q6ZR62 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTL4Q6ZR62 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTL4Q6ZR62 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTL4Q6ZR62 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTL4Q6ZR62 AC005703.6-201ENST00000623265 1329 ntBASIC21.06■□□□□ 0.96
RTL4Q6ZR62 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTL4Q6ZR62 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTL4Q6ZR62 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTL4Q6ZR62 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTL4Q6ZR62 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.06■□□□□ 0.96
RTL4Q6ZR62 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.06■□□□□ 0.96
RTL4Q6ZR62 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTL4Q6ZR62 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTL4Q6ZR62 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTL4Q6ZR62 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RTL4Q6ZR62 AC133561.1-201ENST00000568600 2415 ntBASIC21.05■□□□□ 0.96
RTL4Q6ZR62 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms