Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.6■□□□□ 0.89
NIPAL3Q6P499 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NIPAL3Q6P499 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NIPAL3Q6P499 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NIPAL3Q6P499 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NIPAL3Q6P499 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NIPAL3Q6P499 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NIPAL3Q6P499 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.59■□□□□ 0.89
NIPAL3Q6P499 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.59■□□□□ 0.89
NIPAL3Q6P499 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.59■□□□□ 0.89
NIPAL3Q6P499 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.59■□□□□ 0.89
NIPAL3Q6P499 ANOS2P-203ENST00000472227 1816 ntBASIC20.59■□□□□ 0.89
NIPAL3Q6P499 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NIPAL3Q6P499 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NIPAL3Q6P499 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NIPAL3Q6P499 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.58■□□□□ 0.89
NIPAL3Q6P499 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NIPAL3Q6P499 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NIPAL3Q6P499 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NIPAL3Q6P499 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NIPAL3Q6P499 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.58■□□□□ 0.89
NIPAL3Q6P499 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.58■□□□□ 0.89
NIPAL3Q6P499 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.58■□□□□ 0.89
NIPAL3Q6P499 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.58■□□□□ 0.89
NIPAL3Q6P499 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
NIPAL3Q6P499 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NIPAL3Q6P499 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
NIPAL3Q6P499 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.57■□□□□ 0.88
NIPAL3Q6P499 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NIPAL3Q6P499 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NIPAL3Q6P499 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.57■□□□□ 0.88
NIPAL3Q6P499 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.57■□□□□ 0.88
NIPAL3Q6P499 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.57■□□□□ 0.88
NIPAL3Q6P499 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NIPAL3Q6P499 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
NIPAL3Q6P499 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NIPAL3Q6P499 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NIPAL3Q6P499 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.56■□□□□ 0.88
NIPAL3Q6P499 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NIPAL3Q6P499 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NIPAL3Q6P499 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.56■□□□□ 0.88
NIPAL3Q6P499 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NIPAL3Q6P499 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
NIPAL3Q6P499 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
NIPAL3Q6P499 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NIPAL3Q6P499 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.55■□□□□ 0.88
NIPAL3Q6P499 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NIPAL3Q6P499 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.55■□□□□ 0.88
NIPAL3Q6P499 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NIPAL3Q6P499 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NIPAL3Q6P499 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NIPAL3Q6P499 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.55■□□□□ 0.88
NIPAL3Q6P499 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NIPAL3Q6P499 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
NIPAL3Q6P499 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NIPAL3Q6P499 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NIPAL3Q6P499 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NIPAL3Q6P499 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NIPAL3Q6P499 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
NIPAL3Q6P499 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NIPAL3Q6P499 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NIPAL3Q6P499 AL451085.2-201ENST00000605085 799 ntBASIC20.54■□□□□ 0.88
NIPAL3Q6P499 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.54■□□□□ 0.88
NIPAL3Q6P499 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NIPAL3Q6P499 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NIPAL3Q6P499 AL161729.1-201ENST00000604104 1402 ntBASIC20.53■□□□□ 0.88
NIPAL3Q6P499 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NIPAL3Q6P499 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NIPAL3Q6P499 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.53■□□□□ 0.88
NIPAL3Q6P499 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.53■□□□□ 0.88
NIPAL3Q6P499 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NIPAL3Q6P499 AF131216.4-201ENST00000638924 1588 ntBASIC20.53■□□□□ 0.88
NIPAL3Q6P499 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NIPAL3Q6P499 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NIPAL3Q6P499 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NIPAL3Q6P499 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NIPAL3Q6P499 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NIPAL3Q6P499 AC092068.2-201ENST00000590491 1708 ntBASIC20.53■□□□□ 0.88
NIPAL3Q6P499 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.53■□□□□ 0.88
NIPAL3Q6P499 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NIPAL3Q6P499 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NIPAL3Q6P499 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NIPAL3Q6P499 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.52■□□□□ 0.88
NIPAL3Q6P499 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.52■□□□□ 0.88
NIPAL3Q6P499 AL117328.2-201ENST00000624617 1940 ntBASIC20.52■□□□□ 0.88
NIPAL3Q6P499 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
NIPAL3Q6P499 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NIPAL3Q6P499 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.52■□□□□ 0.87
NIPAL3Q6P499 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.52■□□□□ 0.87
NIPAL3Q6P499 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
NIPAL3Q6P499 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NIPAL3Q6P499 DUSP8P3-201ENST00000399571 1760 ntBASIC20.51■□□□□ 0.87
NIPAL3Q6P499 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NIPAL3Q6P499 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NIPAL3Q6P499 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.51■□□□□ 0.87
NIPAL3Q6P499 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.51■□□□□ 0.87
NIPAL3Q6P499 BX664725.1-201ENST00000438252 379 ntBASIC20.51■□□□□ 0.87
NIPAL3Q6P499 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.51■□□□□ 0.87
NIPAL3Q6P499 AC137630.3-201ENST00000607245 391 ntBASIC20.51■□□□□ 0.87
NIPAL3Q6P499 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms