Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.19■□□□□ 0.34
CDPF1Q6NVV7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CDPF1Q6NVV7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDPF1Q6NVV7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDPF1Q6NVV7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDPF1Q6NVV7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.18■□□□□ 0.34
CDPF1Q6NVV7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CDPF1Q6NVV7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.18■□□□□ 0.34
CDPF1Q6NVV7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDPF1Q6NVV7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDPF1Q6NVV7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDPF1Q6NVV7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.18■□□□□ 0.34
CDPF1Q6NVV7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.18■□□□□ 0.34
CDPF1Q6NVV7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.18■□□□□ 0.34
CDPF1Q6NVV7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDPF1Q6NVV7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDPF1Q6NVV7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.17■□□□□ 0.34
CDPF1Q6NVV7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.17■□□□□ 0.34
CDPF1Q6NVV7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDPF1Q6NVV7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDPF1Q6NVV7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CDPF1Q6NVV7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDPF1Q6NVV7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDPF1Q6NVV7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDPF1Q6NVV7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDPF1Q6NVV7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDPF1Q6NVV7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 DUX4L13-201ENST00000554103 1267 ntBASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 HSD17B1P1-201ENST00000590052 955 ntBASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 DUX4L15-201ENST00000611059 1267 ntBASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 DUX4L23-201ENST00000615195 1269 ntBASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 DUX4L24-201ENST00000617576 1269 ntBASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 DUX4L22-201ENST00000618238 1269 ntBASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 DUX4L20-201ENST00000619712 1269 ntBASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 DUX4L21-201ENST00000622058 1269 ntBASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 DUX4L10-201ENST00000622460 1267 ntBASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 DUX4L25-201ENST00000624915 1269 ntBASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDPF1Q6NVV7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CDPF1Q6NVV7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CDPF1Q6NVV7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.15■□□□□ 0.34
CDPF1Q6NVV7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDPF1Q6NVV7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDPF1Q6NVV7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDPF1Q6NVV7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDPF1Q6NVV7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDPF1Q6NVV7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDPF1Q6NVV7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDPF1Q6NVV7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDPF1Q6NVV7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDPF1Q6NVV7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CDPF1Q6NVV7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CDPF1Q6NVV7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDPF1Q6NVV7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDPF1Q6NVV7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.14■□□□□ 0.33
CDPF1Q6NVV7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDPF1Q6NVV7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDPF1Q6NVV7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDPF1Q6NVV7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.14■□□□□ 0.33
CDPF1Q6NVV7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.14■□□□□ 0.33
CDPF1Q6NVV7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDPF1Q6NVV7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.14■□□□□ 0.33
CDPF1Q6NVV7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDPF1Q6NVV7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDPF1Q6NVV7 AL020996.1-203ENST00000536896 2307 ntBASIC17.14■□□□□ 0.33
CDPF1Q6NVV7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDPF1Q6NVV7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
CDPF1Q6NVV7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDPF1Q6NVV7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDPF1Q6NVV7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDPF1Q6NVV7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDPF1Q6NVV7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDPF1Q6NVV7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDPF1Q6NVV7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDPF1Q6NVV7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDPF1Q6NVV7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CDPF1Q6NVV7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CDPF1Q6NVV7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CDPF1Q6NVV7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CDPF1Q6NVV7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDPF1Q6NVV7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDPF1Q6NVV7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CDPF1Q6NVV7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDPF1Q6NVV7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.12■□□□□ 0.33
CDPF1Q6NVV7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDPF1Q6NVV7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms