Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SWSAP1Q6NVH7 PBX2P1-201ENST00000493219 1291 ntBASIC25.39■■□□□ 1.66
SWSAP1Q6NVH7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
SWSAP1Q6NVH7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.38■■□□□ 1.65
SWSAP1Q6NVH7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SWSAP1Q6NVH7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.38■■□□□ 1.65
SWSAP1Q6NVH7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SWSAP1Q6NVH7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SWSAP1Q6NVH7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SWSAP1Q6NVH7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SWSAP1Q6NVH7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SWSAP1Q6NVH7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
SWSAP1Q6NVH7 C17orf82-201ENST00000623772 1530 ntBASIC25.37■■□□□ 1.65
SWSAP1Q6NVH7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.37■■□□□ 1.65
SWSAP1Q6NVH7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SWSAP1Q6NVH7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SWSAP1Q6NVH7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SWSAP1Q6NVH7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.37■■□□□ 1.65
SWSAP1Q6NVH7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SWSAP1Q6NVH7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.37■■□□□ 1.65
SWSAP1Q6NVH7 AC099791.2-201ENST00000605725 427 ntBASIC25.37■■□□□ 1.65
SWSAP1Q6NVH7 AL136162.1-201ENST00000607711 1078 ntBASIC25.37■■□□□ 1.65
SWSAP1Q6NVH7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SWSAP1Q6NVH7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SWSAP1Q6NVH7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
SWSAP1Q6NVH7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.37■■□□□ 1.65
SWSAP1Q6NVH7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SWSAP1Q6NVH7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.36■■□□□ 1.65
SWSAP1Q6NVH7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.36■■□□□ 1.65
SWSAP1Q6NVH7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.36■■□□□ 1.65
SWSAP1Q6NVH7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SWSAP1Q6NVH7 AC005837.3-201ENST00000612163 286 ntBASIC25.36■■□□□ 1.65
SWSAP1Q6NVH7 AC106739.1-201ENST00000617035 715 ntBASIC25.36■■□□□ 1.65
SWSAP1Q6NVH7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.36■■□□□ 1.65
SWSAP1Q6NVH7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SWSAP1Q6NVH7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
SWSAP1Q6NVH7 LINC00543-201ENST00000567234 1845 ntBASIC25.35■■□□□ 1.65
SWSAP1Q6NVH7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SWSAP1Q6NVH7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
SWSAP1Q6NVH7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SWSAP1Q6NVH7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SWSAP1Q6NVH7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SWSAP1Q6NVH7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SWSAP1Q6NVH7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SWSAP1Q6NVH7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SWSAP1Q6NVH7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.34■■□□□ 1.65
SWSAP1Q6NVH7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.34■■□□□ 1.65
SWSAP1Q6NVH7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.34■■□□□ 1.65
SWSAP1Q6NVH7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
SWSAP1Q6NVH7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SWSAP1Q6NVH7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.34■■□□□ 1.65
SWSAP1Q6NVH7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SWSAP1Q6NVH7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SWSAP1Q6NVH7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SWSAP1Q6NVH7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.33■■□□□ 1.65
SWSAP1Q6NVH7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SWSAP1Q6NVH7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
SWSAP1Q6NVH7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SWSAP1Q6NVH7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.33■■□□□ 1.65
SWSAP1Q6NVH7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.33■■□□□ 1.65
SWSAP1Q6NVH7 AC133561.4-201ENST00000566112 224 ntBASIC25.33■■□□□ 1.65
SWSAP1Q6NVH7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.33■■□□□ 1.65
SWSAP1Q6NVH7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
SWSAP1Q6NVH7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
SWSAP1Q6NVH7 AC141586.4-201ENST00000624558 1573 ntBASIC25.32■■□□□ 1.64
SWSAP1Q6NVH7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SWSAP1Q6NVH7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SWSAP1Q6NVH7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
SWSAP1Q6NVH7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.32■■□□□ 1.64
SWSAP1Q6NVH7 AC024257.2-201ENST00000549699 147 ntBASIC25.32■■□□□ 1.64
SWSAP1Q6NVH7 DUX4L19-201ENST00000557448 1267 ntBASIC25.32■■□□□ 1.64
SWSAP1Q6NVH7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.32■■□□□ 1.64
SWSAP1Q6NVH7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SWSAP1Q6NVH7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SWSAP1Q6NVH7 AC135279.3-201ENST00000610945 1311 ntBASIC25.32■■□□□ 1.64
SWSAP1Q6NVH7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
SWSAP1Q6NVH7 SYT6-210ENST00000641643 1587 ntBASIC25.31■■□□□ 1.64
SWSAP1Q6NVH7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SWSAP1Q6NVH7 AC092171.4-201ENST00000609130 632 ntBASIC25.31■■□□□ 1.64
SWSAP1Q6NVH7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
SWSAP1Q6NVH7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SWSAP1Q6NVH7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
SWSAP1Q6NVH7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SWSAP1Q6NVH7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SWSAP1Q6NVH7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.3■■□□□ 1.64
SWSAP1Q6NVH7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SWSAP1Q6NVH7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SWSAP1Q6NVH7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.3■■□□□ 1.64
SWSAP1Q6NVH7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SWSAP1Q6NVH7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.3■■□□□ 1.64
SWSAP1Q6NVH7 AC004812.2-201ENST00000611079 2094 ntBASIC25.3■■□□□ 1.64
SWSAP1Q6NVH7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
SWSAP1Q6NVH7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SWSAP1Q6NVH7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.29■■□□□ 1.64
SWSAP1Q6NVH7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
SWSAP1Q6NVH7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SWSAP1Q6NVH7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SWSAP1Q6NVH7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SWSAP1Q6NVH7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.29■■□□□ 1.64
SWSAP1Q6NVH7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms