Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.75■■□□□ 1.39
PTCRAQ6ISU1 AC073111.5-205ENST00000641717 521 ntBASIC23.75■■□□□ 1.39
PTCRAQ6ISU1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTCRAQ6ISU1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PTCRAQ6ISU1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.75■■□□□ 1.39
PTCRAQ6ISU1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.75■■□□□ 1.39
PTCRAQ6ISU1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTCRAQ6ISU1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTCRAQ6ISU1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
PTCRAQ6ISU1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.74■■□□□ 1.39
PTCRAQ6ISU1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.74■■□□□ 1.39
PTCRAQ6ISU1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PTCRAQ6ISU1 AC006015.1-201ENST00000429970 570 ntBASIC23.74■■□□□ 1.39
PTCRAQ6ISU1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.74■■□□□ 1.39
PTCRAQ6ISU1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.74■■□□□ 1.39
PTCRAQ6ISU1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.74■■□□□ 1.39
PTCRAQ6ISU1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.74■■□□□ 1.39
PTCRAQ6ISU1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTCRAQ6ISU1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTCRAQ6ISU1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PTCRAQ6ISU1 AC016769.1-201ENST00000409132 1010 ntBASIC23.73■■□□□ 1.39
PTCRAQ6ISU1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTCRAQ6ISU1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
PTCRAQ6ISU1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PTCRAQ6ISU1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTCRAQ6ISU1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PTCRAQ6ISU1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTCRAQ6ISU1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
PTCRAQ6ISU1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PTCRAQ6ISU1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
PTCRAQ6ISU1 AL355802.2-201ENST00000402069 882 ntBASIC23.72■■□□□ 1.39
PTCRAQ6ISU1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PTCRAQ6ISU1 AC066615.1-201ENST00000640911 628 ntBASIC23.72■■□□□ 1.39
PTCRAQ6ISU1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
PTCRAQ6ISU1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PTCRAQ6ISU1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.72■■□□□ 1.39
PTCRAQ6ISU1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.72■■□□□ 1.39
PTCRAQ6ISU1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.72■■□□□ 1.39
PTCRAQ6ISU1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTCRAQ6ISU1 AC096887.2-201ENST00000623443 1957 ntBASIC23.71■■□□□ 1.39
PTCRAQ6ISU1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PTCRAQ6ISU1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PTCRAQ6ISU1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.71■■□□□ 1.39
PTCRAQ6ISU1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PTCRAQ6ISU1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PTCRAQ6ISU1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.71■■□□□ 1.39
PTCRAQ6ISU1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.71■■□□□ 1.39
PTCRAQ6ISU1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.71■■□□□ 1.39
PTCRAQ6ISU1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PTCRAQ6ISU1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.71■■□□□ 1.39
PTCRAQ6ISU1 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.71■■□□□ 1.39
PTCRAQ6ISU1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.71■■□□□ 1.39
PTCRAQ6ISU1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.71■■□□□ 1.39
PTCRAQ6ISU1 AC139426.1-201ENST00000568218 2529 ntBASIC23.71■■□□□ 1.39
PTCRAQ6ISU1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.7■■□□□ 1.39
PTCRAQ6ISU1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PTCRAQ6ISU1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PTCRAQ6ISU1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
PTCRAQ6ISU1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.7■■□□□ 1.38
PTCRAQ6ISU1 AC026185.1-201ENST00000445748 174 ntBASIC23.7■■□□□ 1.38
PTCRAQ6ISU1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PTCRAQ6ISU1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.7■■□□□ 1.38
PTCRAQ6ISU1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCRAQ6ISU1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.69■■□□□ 1.38
PTCRAQ6ISU1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCRAQ6ISU1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PTCRAQ6ISU1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.69■■□□□ 1.38
PTCRAQ6ISU1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCRAQ6ISU1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCRAQ6ISU1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.69■■□□□ 1.38
PTCRAQ6ISU1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.69■■□□□ 1.38
PTCRAQ6ISU1 AC137761.2-201ENST00000561729 223 ntBASIC23.69■■□□□ 1.38
PTCRAQ6ISU1 AC145350.3-201ENST00000569033 163 ntBASIC23.69■■□□□ 1.38
PTCRAQ6ISU1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.69■■□□□ 1.38
PTCRAQ6ISU1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCRAQ6ISU1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PTCRAQ6ISU1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PTCRAQ6ISU1 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.68■■□□□ 1.38
PTCRAQ6ISU1 AL109923.1-201ENST00000618799 583 ntBASIC23.68■■□□□ 1.38
PTCRAQ6ISU1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
PTCRAQ6ISU1 AL022069.1-201ENST00000568025 1636 ntBASIC23.68■■□□□ 1.38
PTCRAQ6ISU1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PTCRAQ6ISU1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
PTCRAQ6ISU1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.67■■□□□ 1.38
PTCRAQ6ISU1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.67■■□□□ 1.38
PTCRAQ6ISU1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.67■■□□□ 1.38
PTCRAQ6ISU1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.67■■□□□ 1.38
PTCRAQ6ISU1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.67■■□□□ 1.38
PTCRAQ6ISU1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
PTCRAQ6ISU1 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.66■■□□□ 1.38
PTCRAQ6ISU1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCRAQ6ISU1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCRAQ6ISU1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCRAQ6ISU1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCRAQ6ISU1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PTCRAQ6ISU1 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.66■■□□□ 1.38
PTCRAQ6ISU1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PTCRAQ6ISU1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.66■■□□□ 1.38
PTCRAQ6ISU1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PTCRAQ6ISU1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms