Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.73■■□□□ 1.39
RNF43Q68DV7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RNF43Q68DV7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF43Q68DV7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.73■■□□□ 1.39
RNF43Q68DV7 AC092666.2-201ENST00000613287 246 ntBASIC23.73■■□□□ 1.39
RNF43Q68DV7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF43Q68DV7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
RNF43Q68DV7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.73■■□□□ 1.39
RNF43Q68DV7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.73■■□□□ 1.39
RNF43Q68DV7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF43Q68DV7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF43Q68DV7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
RNF43Q68DV7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.72■■□□□ 1.39
RNF43Q68DV7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF43Q68DV7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.72■■□□□ 1.39
RNF43Q68DV7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
RNF43Q68DV7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
RNF43Q68DV7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF43Q68DV7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
RNF43Q68DV7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.71■■□□□ 1.39
RNF43Q68DV7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
RNF43Q68DV7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.71■■□□□ 1.39
RNF43Q68DV7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF43Q68DV7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF43Q68DV7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF43Q68DV7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.7■■□□□ 1.39
RNF43Q68DV7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.7■■□□□ 1.38
RNF43Q68DV7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF43Q68DV7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.7■■□□□ 1.38
RNF43Q68DV7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF43Q68DV7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF43Q68DV7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.7■■□□□ 1.38
RNF43Q68DV7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF43Q68DV7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.7■■□□□ 1.38
RNF43Q68DV7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RNF43Q68DV7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF43Q68DV7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RNF43Q68DV7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF43Q68DV7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF43Q68DV7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.69■■□□□ 1.38
RNF43Q68DV7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF43Q68DV7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.69■■□□□ 1.38
RNF43Q68DV7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.69■■□□□ 1.38
RNF43Q68DV7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF43Q68DV7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.69■■□□□ 1.38
RNF43Q68DV7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF43Q68DV7 AP003733.4-201ENST00000623785 1697 ntBASIC23.69■■□□□ 1.38
RNF43Q68DV7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF43Q68DV7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
RNF43Q68DV7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
RNF43Q68DV7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.68■■□□□ 1.38
RNF43Q68DV7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
RNF43Q68DV7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF43Q68DV7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNF43Q68DV7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNF43Q68DV7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF43Q68DV7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RNF43Q68DV7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF43Q68DV7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF43Q68DV7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF43Q68DV7 AL512631.2-201ENST00000604634 923 ntBASIC23.67■■□□□ 1.38
RNF43Q68DV7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF43Q68DV7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF43Q68DV7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF43Q68DV7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF43Q68DV7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF43Q68DV7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF43Q68DV7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF43Q68DV7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.66■■□□□ 1.38
RNF43Q68DV7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF43Q68DV7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.66■■□□□ 1.38
RNF43Q68DV7 AL356740.2-201ENST00000601559 647 ntBASIC23.66■■□□□ 1.38
RNF43Q68DV7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
RNF43Q68DV7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
RNF43Q68DV7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF43Q68DV7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF43Q68DV7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF43Q68DV7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
RNF43Q68DV7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF43Q68DV7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF43Q68DV7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF43Q68DV7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.65■■□□□ 1.38
RNF43Q68DV7 AC133561.4-201ENST00000566112 224 ntBASIC23.65■■□□□ 1.38
RNF43Q68DV7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.65■■□□□ 1.38
RNF43Q68DV7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF43Q68DV7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
RNF43Q68DV7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
RNF43Q68DV7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.64■■□□□ 1.38
RNF43Q68DV7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF43Q68DV7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.64■■□□□ 1.37
RNF43Q68DV7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF43Q68DV7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.64■■□□□ 1.37
RNF43Q68DV7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.64■■□□□ 1.37
RNF43Q68DV7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RNF43Q68DV7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.64■■□□□ 1.37
RNF43Q68DV7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF43Q68DV7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.63■■□□□ 1.37
RNF43Q68DV7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF43Q68DV7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF43Q68DV7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms