Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDKAL1Q5VV42 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CDKAL1Q5VV42 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDKAL1Q5VV42 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CDKAL1Q5VV42 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDKAL1Q5VV42 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDKAL1Q5VV42 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDKAL1Q5VV42 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDKAL1Q5VV42 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.95■■□□□ 1.58
CDKAL1Q5VV42 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDKAL1Q5VV42 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.95■■□□□ 1.58
CDKAL1Q5VV42 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDKAL1Q5VV42 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDKAL1Q5VV42 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.94■■□□□ 1.58
CDKAL1Q5VV42 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CDKAL1Q5VV42 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.94■■□□□ 1.58
CDKAL1Q5VV42 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDKAL1Q5VV42 DUX4L18-201ENST00000553347 1267 ntBASIC24.94■■□□□ 1.58
CDKAL1Q5VV42 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.94■■□□□ 1.58
CDKAL1Q5VV42 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
CDKAL1Q5VV42 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDKAL1Q5VV42 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDKAL1Q5VV42 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CDKAL1Q5VV42 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.93■■□□□ 1.58
CDKAL1Q5VV42 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
CDKAL1Q5VV42 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDKAL1Q5VV42 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.92■■□□□ 1.58
CDKAL1Q5VV42 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CDKAL1Q5VV42 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.92■■□□□ 1.58
CDKAL1Q5VV42 AC120024.1-201ENST00000562672 995 ntBASIC24.92■■□□□ 1.58
CDKAL1Q5VV42 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDKAL1Q5VV42 AF131216.4-201ENST00000638924 1588 ntBASIC24.92■■□□□ 1.58
CDKAL1Q5VV42 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.92■■□□□ 1.58
CDKAL1Q5VV42 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.92■■□□□ 1.58
CDKAL1Q5VV42 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.91■■□□□ 1.58
CDKAL1Q5VV42 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CDKAL1Q5VV42 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDKAL1Q5VV42 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
CDKAL1Q5VV42 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.91■■□□□ 1.58
CDKAL1Q5VV42 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDKAL1Q5VV42 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.91■■□□□ 1.58
CDKAL1Q5VV42 AC139795.1-202ENST00000500444 432 ntBASIC24.91■■□□□ 1.58
CDKAL1Q5VV42 NTF6A-201ENST00000591175 560 ntBASIC24.91■■□□□ 1.58
CDKAL1Q5VV42 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
CDKAL1Q5VV42 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.58
CDKAL1Q5VV42 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CDKAL1Q5VV42 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CDKAL1Q5VV42 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CDKAL1Q5VV42 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
CDKAL1Q5VV42 EP400NL-214ENST00000641289 2402 ntBASIC24.91■■□□□ 1.58
CDKAL1Q5VV42 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.9■■□□□ 1.58
CDKAL1Q5VV42 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDKAL1Q5VV42 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDKAL1Q5VV42 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.9■■□□□ 1.58
CDKAL1Q5VV42 ABHD17AP5-201ENST00000580133 923 ntBASIC24.9■■□□□ 1.58
CDKAL1Q5VV42 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDKAL1Q5VV42 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDKAL1Q5VV42 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
CDKAL1Q5VV42 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDKAL1Q5VV42 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDKAL1Q5VV42 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDKAL1Q5VV42 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDKAL1Q5VV42 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.89■■□□□ 1.58
CDKAL1Q5VV42 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.89■■□□□ 1.58
CDKAL1Q5VV42 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CDKAL1Q5VV42 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CDKAL1Q5VV42 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
CDKAL1Q5VV42 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
CDKAL1Q5VV42 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDKAL1Q5VV42 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
CDKAL1Q5VV42 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDKAL1Q5VV42 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDKAL1Q5VV42 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDKAL1Q5VV42 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.88■■□□□ 1.57
CDKAL1Q5VV42 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CDKAL1Q5VV42 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CDKAL1Q5VV42 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.88■■□□□ 1.57
CDKAL1Q5VV42 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDKAL1Q5VV42 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.88■■□□□ 1.57
CDKAL1Q5VV42 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDKAL1Q5VV42 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDKAL1Q5VV42 PVT1_1.1-201ENST00000615125 194 ntBASIC24.87■■□□□ 1.57
CDKAL1Q5VV42 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDKAL1Q5VV42 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
CDKAL1Q5VV42 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDKAL1Q5VV42 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDKAL1Q5VV42 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
CDKAL1Q5VV42 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDKAL1Q5VV42 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CDKAL1Q5VV42 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDKAL1Q5VV42 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CDKAL1Q5VV42 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDKAL1Q5VV42 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDKAL1Q5VV42 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDKAL1Q5VV42 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDKAL1Q5VV42 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.85■■□□□ 1.57
CDKAL1Q5VV42 MIR4281-201ENST00000580852 62 ntBASIC24.85■■□□□ 1.57
CDKAL1Q5VV42 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDKAL1Q5VV42 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.84■■□□□ 1.57
CDKAL1Q5VV42 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.84■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms