Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RNF220Q5VTB9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF220Q5VTB9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF220Q5VTB9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF220Q5VTB9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RNF220Q5VTB9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF220Q5VTB9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF220Q5VTB9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF220Q5VTB9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
RNF220Q5VTB9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF220Q5VTB9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF220Q5VTB9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF220Q5VTB9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RNF220Q5VTB9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF220Q5VTB9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF220Q5VTB9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF220Q5VTB9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF220Q5VTB9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF220Q5VTB9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF220Q5VTB9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RNF220Q5VTB9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
RNF220Q5VTB9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF220Q5VTB9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF220Q5VTB9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF220Q5VTB9 RARRES2P2-201ENST00000394842 485 ntBASIC21.68■■□□□ 1.06
RNF220Q5VTB9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RNF220Q5VTB9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF220Q5VTB9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF220Q5VTB9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RNF220Q5VTB9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.68■■□□□ 1.06
RNF220Q5VTB9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF220Q5VTB9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF220Q5VTB9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF220Q5VTB9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF220Q5VTB9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RNF220Q5VTB9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF220Q5VTB9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF220Q5VTB9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RNF220Q5VTB9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF220Q5VTB9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.67■■□□□ 1.06
RNF220Q5VTB9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.67■■□□□ 1.06
RNF220Q5VTB9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RNF220Q5VTB9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RNF220Q5VTB9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
RNF220Q5VTB9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 AC073130.3-201ENST00000624389 2278 ntBASIC21.66■■□□□ 1.06
RNF220Q5VTB9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 HSD17B1P1-201ENST00000590052 955 ntBASIC21.66■■□□□ 1.06
RNF220Q5VTB9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 GUSBP5-202ENST00000510805 1989 ntBASIC21.66■■□□□ 1.06
RNF220Q5VTB9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF220Q5VTB9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
RNF220Q5VTB9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF220Q5VTB9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF220Q5VTB9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RNF220Q5VTB9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.65■■□□□ 1.06
RNF220Q5VTB9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF220Q5VTB9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF220Q5VTB9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF220Q5VTB9 AL592293.1-201ENST00000502889 1188 ntBASIC21.65■■□□□ 1.06
RNF220Q5VTB9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF220Q5VTB9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF220Q5VTB9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
RNF220Q5VTB9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF220Q5VTB9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF220Q5VTB9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF220Q5VTB9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF220Q5VTB9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF220Q5VTB9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF220Q5VTB9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RNF220Q5VTB9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
RNF220Q5VTB9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RNF220Q5VTB9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RNF220Q5VTB9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF220Q5VTB9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF220Q5VTB9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF220Q5VTB9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.63■■□□□ 1.05
RNF220Q5VTB9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF220Q5VTB9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RNF220Q5VTB9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF220Q5VTB9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF220Q5VTB9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.63■■□□□ 1.05
RNF220Q5VTB9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms