Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 RNF126P1-201ENST00000567452 1320 ntBASIC20.42■□□□□ 0.86
LCN1P1Q5VSP4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
LCN1P1Q5VSP4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LCN1P1Q5VSP4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.42■□□□□ 0.86
LCN1P1Q5VSP4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LCN1P1Q5VSP4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LCN1P1Q5VSP4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LCN1P1Q5VSP4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
LCN1P1Q5VSP4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCN1P1Q5VSP4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCN1P1Q5VSP4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCN1P1Q5VSP4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.41■□□□□ 0.86
LCN1P1Q5VSP4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.41■□□□□ 0.86
LCN1P1Q5VSP4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.41■□□□□ 0.86
LCN1P1Q5VSP4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCN1P1Q5VSP4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
LCN1P1Q5VSP4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LCN1P1Q5VSP4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCN1P1Q5VSP4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LCN1P1Q5VSP4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LCN1P1Q5VSP4 AC092068.2-201ENST00000590491 1708 ntBASIC20.41■□□□□ 0.86
LCN1P1Q5VSP4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LCN1P1Q5VSP4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LCN1P1Q5VSP4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LCN1P1Q5VSP4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.4■□□□□ 0.86
LCN1P1Q5VSP4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LCN1P1Q5VSP4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
LCN1P1Q5VSP4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LCN1P1Q5VSP4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
LCN1P1Q5VSP4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.4■□□□□ 0.86
LCN1P1Q5VSP4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LCN1P1Q5VSP4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LCN1P1Q5VSP4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.4■□□□□ 0.86
LCN1P1Q5VSP4 MIR6765-201ENST00000614092 87 ntBASIC20.4■□□□□ 0.86
LCN1P1Q5VSP4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.4■□□□□ 0.86
LCN1P1Q5VSP4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LCN1P1Q5VSP4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.39■□□□□ 0.86
LCN1P1Q5VSP4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
LCN1P1Q5VSP4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.39■□□□□ 0.86
LCN1P1Q5VSP4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
LCN1P1Q5VSP4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LCN1P1Q5VSP4 AL022069.1-201ENST00000568025 1636 ntBASIC20.39■□□□□ 0.86
LCN1P1Q5VSP4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LCN1P1Q5VSP4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
LCN1P1Q5VSP4 EP400NL-214ENST00000641289 2402 ntBASIC20.39■□□□□ 0.85
LCN1P1Q5VSP4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
LCN1P1Q5VSP4 AC233723.2-201ENST00000623798 2106 ntBASIC20.39■□□□□ 0.85
LCN1P1Q5VSP4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.39■□□□□ 0.85
LCN1P1Q5VSP4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
LCN1P1Q5VSP4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LCN1P1Q5VSP4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.38■□□□□ 0.85
LCN1P1Q5VSP4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.38■□□□□ 0.85
LCN1P1Q5VSP4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.38■□□□□ 0.85
LCN1P1Q5VSP4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
LCN1P1Q5VSP4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LCN1P1Q5VSP4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LCN1P1Q5VSP4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LCN1P1Q5VSP4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LCN1P1Q5VSP4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.38■□□□□ 0.85
LCN1P1Q5VSP4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LCN1P1Q5VSP4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.38■□□□□ 0.85
LCN1P1Q5VSP4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LCN1P1Q5VSP4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LCN1P1Q5VSP4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LCN1P1Q5VSP4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LCN1P1Q5VSP4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LCN1P1Q5VSP4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCN1P1Q5VSP4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCN1P1Q5VSP4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.37■□□□□ 0.85
LCN1P1Q5VSP4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
LCN1P1Q5VSP4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LCN1P1Q5VSP4 SPCS2P3-201ENST00000500401 656 ntBASIC20.37■□□□□ 0.85
LCN1P1Q5VSP4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCN1P1Q5VSP4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCN1P1Q5VSP4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCN1P1Q5VSP4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCN1P1Q5VSP4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LCN1P1Q5VSP4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCN1P1Q5VSP4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCN1P1Q5VSP4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LCN1P1Q5VSP4 DUSP8P3-201ENST00000399571 1760 ntBASIC20.36■□□□□ 0.85
LCN1P1Q5VSP4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LCN1P1Q5VSP4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LCN1P1Q5VSP4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LCN1P1Q5VSP4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LCN1P1Q5VSP4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LCN1P1Q5VSP4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LCN1P1Q5VSP4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LCN1P1Q5VSP4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LCN1P1Q5VSP4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LCN1P1Q5VSP4 AL024507.2-201ENST00000606070 2574 ntBASIC20.35■□□□□ 0.85
LCN1P1Q5VSP4 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.35■□□□□ 0.85
LCN1P1Q5VSP4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.35■□□□□ 0.85
LCN1P1Q5VSP4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LCN1P1Q5VSP4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LCN1P1Q5VSP4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LCN1P1Q5VSP4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LCN1P1Q5VSP4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LCN1P1Q5VSP4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms