Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.06■□□□□ 0.8
LRRK2Q5S007 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRK2Q5S007 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.06■□□□□ 0.8
LRRK2Q5S007 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRK2Q5S007 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRK2Q5S007 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.06■□□□□ 0.8
LRRK2Q5S007 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRK2Q5S007 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LRRK2Q5S007 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRK2Q5S007 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LRRK2Q5S007 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LRRK2Q5S007 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.06■□□□□ 0.8
LRRK2Q5S007 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.06■□□□□ 0.8
LRRK2Q5S007 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRK2Q5S007 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRK2Q5S007 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRK2Q5S007 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LRRK2Q5S007 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRK2Q5S007 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
LRRK2Q5S007 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRK2Q5S007 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRK2Q5S007 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRK2Q5S007 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LRRK2Q5S007 GPX1P1-201ENST00000388829 606 ntBASIC20.04■□□□□ 0.8
LRRK2Q5S007 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRK2Q5S007 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRK2Q5S007 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
LRRK2Q5S007 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRK2Q5S007 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRK2Q5S007 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRK2Q5S007 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.04■□□□□ 0.8
LRRK2Q5S007 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.04■□□□□ 0.8
LRRK2Q5S007 AP004609.3-201ENST00000610705 1884 ntBASIC20.04■□□□□ 0.8
LRRK2Q5S007 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRK2Q5S007 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
LRRK2Q5S007 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRK2Q5S007 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRK2Q5S007 AP005435.1-201ENST00000529293 1178 ntBASIC20.03■□□□□ 0.8
LRRK2Q5S007 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRK2Q5S007 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
LRRK2Q5S007 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRK2Q5S007 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.03■□□□□ 0.8
LRRK2Q5S007 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.03■□□□□ 0.8
LRRK2Q5S007 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
LRRK2Q5S007 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.03■□□□□ 0.8
LRRK2Q5S007 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRK2Q5S007 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.03■□□□□ 0.8
LRRK2Q5S007 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.03■□□□□ 0.8
LRRK2Q5S007 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRK2Q5S007 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.02■□□□□ 0.8
LRRK2Q5S007 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRRK2Q5S007 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRK2Q5S007 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRK2Q5S007 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.02■□□□□ 0.8
LRRK2Q5S007 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
LRRK2Q5S007 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRK2Q5S007 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LRRK2Q5S007 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRRK2Q5S007 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRK2Q5S007 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LRRK2Q5S007 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
LRRK2Q5S007 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.01■□□□□ 0.79
LRRK2Q5S007 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRK2Q5S007 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRK2Q5S007 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.01■□□□□ 0.79
LRRK2Q5S007 BID-214ENST00000617586 542 ntTSL 5 BASIC20.01■□□□□ 0.79
LRRK2Q5S007 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRK2Q5S007 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRK2Q5S007 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LRRK2Q5S007 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRK2Q5S007 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRK2Q5S007 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.01■□□□□ 0.79
LRRK2Q5S007 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
LRRK2Q5S007 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LRRK2Q5S007 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRK2Q5S007 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20■□□□□ 0.79
LRRK2Q5S007 AC073210.2-201ENST00000430369 194 ntBASIC20■□□□□ 0.79
LRRK2Q5S007 KRT18P6-201ENST00000555540 1265 ntBASIC20■□□□□ 0.79
LRRK2Q5S007 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRK2Q5S007 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRK2Q5S007 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20■□□□□ 0.79
LRRK2Q5S007 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRK2Q5S007 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRK2Q5S007 AC004854.2-201ENST00000608450 1441 ntBASIC19.99■□□□□ 0.79
LRRK2Q5S007 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRK2Q5S007 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.99■□□□□ 0.79
LRRK2Q5S007 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRK2Q5S007 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.99■□□□□ 0.79
LRRK2Q5S007 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRK2Q5S007 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.99■□□□□ 0.79
LRRK2Q5S007 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRRK2Q5S007 AC131274.2-201ENST00000580697 1507 ntBASIC19.99■□□□□ 0.79
LRRK2Q5S007 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRK2Q5S007 PRORSD1P-201ENST00000295112 541 ntBASIC19.98■□□□□ 0.79
LRRK2Q5S007 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LRRK2Q5S007 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.98■□□□□ 0.79
LRRK2Q5S007 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRRK2Q5S007 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.98■□□□□ 0.79
LRRK2Q5S007 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.98■□□□□ 0.79
LRRK2Q5S007 LINC02228-203ENST00000641970 1355 ntBASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms