Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.41■□□□□ 0.86
KRTCAP3Q53RY4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
KRTCAP3Q53RY4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.41■□□□□ 0.86
KRTCAP3Q53RY4 HLA-L-211ENST00000482052 1765 ntBASIC20.41■□□□□ 0.86
KRTCAP3Q53RY4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
KRTCAP3Q53RY4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.41■□□□□ 0.86
KRTCAP3Q53RY4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.41■□□□□ 0.86
KRTCAP3Q53RY4 AC135731.1-201ENST00000569415 2548 ntBASIC20.41■□□□□ 0.86
KRTCAP3Q53RY4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRTCAP3Q53RY4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRTCAP3Q53RY4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRTCAP3Q53RY4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.4■□□□□ 0.86
KRTCAP3Q53RY4 AC006455.2-201ENST00000429931 906 ntBASIC20.4■□□□□ 0.86
KRTCAP3Q53RY4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.4■□□□□ 0.86
KRTCAP3Q53RY4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
KRTCAP3Q53RY4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.4■□□□□ 0.86
KRTCAP3Q53RY4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRTCAP3Q53RY4 ALDH1A3-203ENST00000557963 1670 ntBASIC20.39■□□□□ 0.86
KRTCAP3Q53RY4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRTCAP3Q53RY4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRTCAP3Q53RY4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.39■□□□□ 0.85
KRTCAP3Q53RY4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRTCAP3Q53RY4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRTCAP3Q53RY4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRTCAP3Q53RY4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRTCAP3Q53RY4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRTCAP3Q53RY4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.85
KRTCAP3Q53RY4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRTCAP3Q53RY4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRTCAP3Q53RY4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
KRTCAP3Q53RY4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.38■□□□□ 0.85
KRTCAP3Q53RY4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
KRTCAP3Q53RY4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRTCAP3Q53RY4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.38■□□□□ 0.85
KRTCAP3Q53RY4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.38■□□□□ 0.85
KRTCAP3Q53RY4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.38■□□□□ 0.85
KRTCAP3Q53RY4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.38■□□□□ 0.85
KRTCAP3Q53RY4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.38■□□□□ 0.85
KRTCAP3Q53RY4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRTCAP3Q53RY4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRTCAP3Q53RY4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.38■□□□□ 0.85
KRTCAP3Q53RY4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRTCAP3Q53RY4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.38■□□□□ 0.85
KRTCAP3Q53RY4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
KRTCAP3Q53RY4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
KRTCAP3Q53RY4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRTCAP3Q53RY4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.37■□□□□ 0.85
KRTCAP3Q53RY4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.37■□□□□ 0.85
KRTCAP3Q53RY4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
KRTCAP3Q53RY4 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.37■□□□□ 0.85
KRTCAP3Q53RY4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRTCAP3Q53RY4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
KRTCAP3Q53RY4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRTCAP3Q53RY4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRTCAP3Q53RY4 AC141586.4-201ENST00000624558 1573 ntBASIC20.37■□□□□ 0.85
KRTCAP3Q53RY4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRTCAP3Q53RY4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
KRTCAP3Q53RY4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.36■□□□□ 0.85
KRTCAP3Q53RY4 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.36■□□□□ 0.85
KRTCAP3Q53RY4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.36■□□□□ 0.85
KRTCAP3Q53RY4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.36■□□□□ 0.85
KRTCAP3Q53RY4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRTCAP3Q53RY4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRTCAP3Q53RY4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.36■□□□□ 0.85
KRTCAP3Q53RY4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRTCAP3Q53RY4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.35■□□□□ 0.85
KRTCAP3Q53RY4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRTCAP3Q53RY4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRTCAP3Q53RY4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRTCAP3Q53RY4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRTCAP3Q53RY4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRTCAP3Q53RY4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRTCAP3Q53RY4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.35■□□□□ 0.85
KRTCAP3Q53RY4 pRNA.6-201ENST00000610482 90 ntBASIC20.35■□□□□ 0.85
KRTCAP3Q53RY4 pRNA.5-201ENST00000612139 90 ntBASIC20.35■□□□□ 0.85
KRTCAP3Q53RY4 pRNA.11-201ENST00000618423 90 ntBASIC20.35■□□□□ 0.85
KRTCAP3Q53RY4 pRNA.13-201ENST00000619112 90 ntBASIC20.35■□□□□ 0.85
KRTCAP3Q53RY4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRTCAP3Q53RY4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.35■□□□□ 0.85
KRTCAP3Q53RY4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
KRTCAP3Q53RY4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRTCAP3Q53RY4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRTCAP3Q53RY4 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.34■□□□□ 0.85
KRTCAP3Q53RY4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.34■□□□□ 0.85
KRTCAP3Q53RY4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.34■□□□□ 0.85
KRTCAP3Q53RY4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRTCAP3Q53RY4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRTCAP3Q53RY4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRTCAP3Q53RY4 AC087623.3-201ENST00000607047 1098 ntBASIC20.34■□□□□ 0.85
KRTCAP3Q53RY4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
KRTCAP3Q53RY4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.34■□□□□ 0.85
KRTCAP3Q53RY4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRTCAP3Q53RY4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRTCAP3Q53RY4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRTCAP3Q53RY4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRTCAP3Q53RY4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRTCAP3Q53RY4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KRTCAP3Q53RY4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRTCAP3Q53RY4 AC126544.1-201ENST00000580842 1059 ntBASIC20.33■□□□□ 0.85
KRTCAP3Q53RY4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms