Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01554Q52M75 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01554Q52M75 RARG-204ENST00000543726 1779 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01554Q52M75 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC01554Q52M75 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01554Q52M75 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01554Q52M75 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01554Q52M75 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01554Q52M75 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01554Q52M75 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01554Q52M75 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01554Q52M75 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01554Q52M75 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
LINC01554Q52M75 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC01554Q52M75 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01554Q52M75 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01554Q52M75 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01554Q52M75 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01554Q52M75 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
LINC01554Q52M75 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01554Q52M75 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC01554Q52M75 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
LINC01554Q52M75 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.59
LINC01554Q52M75 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
LINC01554Q52M75 STK25-234ENST00000535007 2459 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC01554Q52M75 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
LINC01554Q52M75 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC01554Q52M75 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
LINC01554Q52M75 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC01554Q52M75 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01554Q52M75 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01554Q52M75 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
LINC01554Q52M75 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01554Q52M75 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01554Q52M75 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01554Q52M75 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01554Q52M75 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01554Q52M75 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01554Q52M75 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01554Q52M75 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC01554Q52M75 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LINC01554Q52M75 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC11.32□□□□□ -0.6
LINC01554Q52M75 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01554Q52M75 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01554Q52M75 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01554Q52M75 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01554Q52M75 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC01554Q52M75 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01554Q52M75 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01554Q52M75 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01554Q52M75 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
LINC01554Q52M75 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01554Q52M75 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
LINC01554Q52M75 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01554Q52M75 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01554Q52M75 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01554Q52M75 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC01554Q52M75 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
LINC01554Q52M75 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC01554Q52M75 AP002414.2-202ENST00000590929 1450 ntBASIC11.31□□□□□ -0.6
LINC01554Q52M75 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01554Q52M75 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01554Q52M75 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01554Q52M75 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01554Q52M75 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01554Q52M75 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01554Q52M75 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
LINC01554Q52M75 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01554Q52M75 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC01554Q52M75 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01554Q52M75 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01554Q52M75 AC007375.3-201ENST00000600936 2314 ntBASIC11.3□□□□□ -0.6
LINC01554Q52M75 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LINC01554Q52M75 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01554Q52M75 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01554Q52M75 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
LINC01554Q52M75 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC01554Q52M75 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC01554Q52M75 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01554Q52M75 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01554Q52M75 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC01554Q52M75 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC01554Q52M75 AC011270.2-201ENST00000624293 2550 ntBASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms