Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CLDN20P56880 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN20P56880 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN20P56880 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN20P56880 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CLDN20P56880 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN20P56880 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN20P56880 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CLDN20P56880 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.71■□□□□ 0.91
CLDN20P56880 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN20P56880 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN20P56880 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN20P56880 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN20P56880 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLDN20P56880 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN20P56880 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN20P56880 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN20P56880 AL022069.1-201ENST00000568025 1636 ntBASIC20.71■□□□□ 0.91
CLDN20P56880 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
CLDN20P56880 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN20P56880 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN20P56880 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN20P56880 DUSP8P5-201ENST00000422884 1815 ntBASIC20.7■□□□□ 0.9
CLDN20P56880 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN20P56880 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN20P56880 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.7■□□□□ 0.9
CLDN20P56880 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLDN20P56880 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.7■□□□□ 0.9
CLDN20P56880 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN20P56880 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN20P56880 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN20P56880 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN20P56880 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN20P56880 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN20P56880 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN20P56880 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN20P56880 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.69■□□□□ 0.9
CLDN20P56880 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN20P56880 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.69■□□□□ 0.9
CLDN20P56880 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.69■□□□□ 0.9
CLDN20P56880 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN20P56880 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN20P56880 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN20P56880 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN20P56880 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN20P56880 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN20P56880 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN20P56880 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN20P56880 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CLDN20P56880 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN20P56880 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.68■□□□□ 0.9
CLDN20P56880 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.68■□□□□ 0.9
CLDN20P56880 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN20P56880 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN20P56880 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN20P56880 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.68■□□□□ 0.9
CLDN20P56880 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.68■□□□□ 0.9
CLDN20P56880 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.68■□□□□ 0.9
CLDN20P56880 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.68■□□□□ 0.9
CLDN20P56880 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.68■□□□□ 0.9
CLDN20P56880 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.68■□□□□ 0.9
CLDN20P56880 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CLDN20P56880 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CLDN20P56880 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN20P56880 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN20P56880 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN20P56880 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CLDN20P56880 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CLDN20P56880 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN20P56880 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CLDN20P56880 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CLDN20P56880 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN20P56880 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN20P56880 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.67■□□□□ 0.9
CLDN20P56880 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.67■□□□□ 0.9
CLDN20P56880 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN20P56880 MIR6722-201ENST00000617286 78 ntBASIC20.67■□□□□ 0.9
CLDN20P56880 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN20P56880 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CLDN20P56880 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN20P56880 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN20P56880 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN20P56880 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN20P56880 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN20P56880 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN20P56880 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN20P56880 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN20P56880 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN20P56880 MIR6724-1-201ENST00000616420 92 ntBASIC20.66■□□□□ 0.9
CLDN20P56880 MIR6724-2-201ENST00000616483 92 ntBASIC20.66■□□□□ 0.9
CLDN20P56880 MIR6724-4-201ENST00000617390 92 ntBASIC20.66■□□□□ 0.9
CLDN20P56880 MIR6724-3-201ENST00000622482 92 ntBASIC20.66■□□□□ 0.9
CLDN20P56880 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN20P56880 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN20P56880 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN20P56880 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN20P56880 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN20P56880 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN20P56880 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN20P56880 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms