Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PSMD4P55036 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PSMD4P55036 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.04■□□□□ 0.96
PSMD4P55036 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PSMD4P55036 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PSMD4P55036 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PSMD4P55036 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PSMD4P55036 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PSMD4P55036 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PSMD4P55036 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.03■□□□□ 0.96
PSMD4P55036 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.03■□□□□ 0.96
PSMD4P55036 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PSMD4P55036 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.03■□□□□ 0.96
PSMD4P55036 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.03■□□□□ 0.96
PSMD4P55036 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PSMD4P55036 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PSMD4P55036 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PSMD4P55036 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.03■□□□□ 0.96
PSMD4P55036 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PSMD4P55036 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.03■□□□□ 0.96
PSMD4P55036 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.03■□□□□ 0.96
PSMD4P55036 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PSMD4P55036 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PSMD4P55036 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.02■□□□□ 0.96
PSMD4P55036 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.02■□□□□ 0.96
PSMD4P55036 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PSMD4P55036 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PSMD4P55036 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
PSMD4P55036 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.02■□□□□ 0.96
PSMD4P55036 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.02■□□□□ 0.96
PSMD4P55036 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PSMD4P55036 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
PSMD4P55036 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PSMD4P55036 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PSMD4P55036 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.01■□□□□ 0.95
PSMD4P55036 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.01■□□□□ 0.95
PSMD4P55036 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.01■□□□□ 0.95
PSMD4P55036 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PSMD4P55036 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PSMD4P55036 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.01■□□□□ 0.95
PSMD4P55036 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.01■□□□□ 0.95
PSMD4P55036 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PSMD4P55036 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PSMD4P55036 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PSMD4P55036 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21■□□□□ 0.95
PSMD4P55036 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PSMD4P55036 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21■□□□□ 0.95
PSMD4P55036 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21■□□□□ 0.95
PSMD4P55036 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PSMD4P55036 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
PSMD4P55036 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PSMD4P55036 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21■□□□□ 0.95
PSMD4P55036 AC005703.6-201ENST00000623265 1329 ntBASIC21■□□□□ 0.95
PSMD4P55036 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PSMD4P55036 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21■□□□□ 0.95
PSMD4P55036 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21■□□□□ 0.95
PSMD4P55036 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PSMD4P55036 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PSMD4P55036 TSPY9P-201ENST00000440215 945 ntBASIC20.99■□□□□ 0.95
PSMD4P55036 TSPY11P-201ENST00000442607 1045 ntBASIC20.99■□□□□ 0.95
PSMD4P55036 AC010997.5-201ENST00000609182 354 ntBASIC20.99■□□□□ 0.95
PSMD4P55036 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PSMD4P55036 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.99■□□□□ 0.95
PSMD4P55036 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.98■□□□□ 0.95
PSMD4P55036 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
PSMD4P55036 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PSMD4P55036 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.98■□□□□ 0.95
PSMD4P55036 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PSMD4P55036 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PSMD4P55036 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
PSMD4P55036 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.98■□□□□ 0.95
PSMD4P55036 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PSMD4P55036 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PSMD4P55036 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PSMD4P55036 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PSMD4P55036 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PSMD4P55036 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.97■□□□□ 0.95
PSMD4P55036 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.97■□□□□ 0.95
PSMD4P55036 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PSMD4P55036 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.97■□□□□ 0.95
PSMD4P55036 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PSMD4P55036 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PSMD4P55036 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PSMD4P55036 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.97■□□□□ 0.95
PSMD4P55036 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PSMD4P55036 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.97■□□□□ 0.95
PSMD4P55036 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
PSMD4P55036 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PSMD4P55036 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PSMD4P55036 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PSMD4P55036 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PSMD4P55036 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PSMD4P55036 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PSMD4P55036 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PSMD4P55036 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PSMD4P55036 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
PSMD4P55036 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.96■□□□□ 0.95
PSMD4P55036 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.96■□□□□ 0.95
PSMD4P55036 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.96■□□□□ 0.95
PSMD4P55036 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms