Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CLCN1P35523 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CLCN1P35523 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.73■■□□□ 1.71
CLCN1P35523 RP9P-202ENST00000450133 1212 ntBASIC25.73■■□□□ 1.71
CLCN1P35523 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.73■■□□□ 1.71
CLCN1P35523 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CLCN1P35523 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CLCN1P35523 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC25.73■■□□□ 1.71
CLCN1P35523 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CLCN1P35523 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CLCN1P35523 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CLCN1P35523 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CLCN1P35523 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
CLCN1P35523 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLCN1P35523 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLCN1P35523 AC007029.1-201ENST00000604183 313 ntBASIC25.72■■□□□ 1.71
CLCN1P35523 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLCN1P35523 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CLCN1P35523 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.71■■□□□ 1.71
CLCN1P35523 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CLCN1P35523 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.71■■□□□ 1.71
CLCN1P35523 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CLCN1P35523 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC25.71■■□□□ 1.71
CLCN1P35523 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CLCN1P35523 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CLCN1P35523 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.71
CLCN1P35523 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CLCN1P35523 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.7■■□□□ 1.7
CLCN1P35523 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CLCN1P35523 AC093536.1-201ENST00000569153 554 ntBASIC25.7■■□□□ 1.7
CLCN1P35523 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
CLCN1P35523 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.7■■□□□ 1.7
CLCN1P35523 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CLCN1P35523 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
CLCN1P35523 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
CLCN1P35523 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CLCN1P35523 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CLCN1P35523 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CLCN1P35523 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CLCN1P35523 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CLCN1P35523 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CLCN1P35523 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CLCN1P35523 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CLCN1P35523 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.69■■□□□ 1.7
CLCN1P35523 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLCN1P35523 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.68■■□□□ 1.7
CLCN1P35523 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.68■■□□□ 1.7
CLCN1P35523 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLCN1P35523 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
CLCN1P35523 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC25.67■■□□□ 1.7
CLCN1P35523 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CLCN1P35523 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.67■■□□□ 1.7
CLCN1P35523 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.67■■□□□ 1.7
CLCN1P35523 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CLCN1P35523 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.67■■□□□ 1.7
CLCN1P35523 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.67■■□□□ 1.7
CLCN1P35523 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLCN1P35523 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLCN1P35523 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CLCN1P35523 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CLCN1P35523 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CLCN1P35523 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.65■■□□□ 1.7
CLCN1P35523 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.65■■□□□ 1.7
CLCN1P35523 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
CLCN1P35523 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLCN1P35523 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
CLCN1P35523 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CLCN1P35523 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLCN1P35523 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CLCN1P35523 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CLCN1P35523 RNF126P1-201ENST00000567452 1320 ntBASIC25.64■■□□□ 1.7
CLCN1P35523 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.64■■□□□ 1.7
CLCN1P35523 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.64■■□□□ 1.7
CLCN1P35523 RAP2CP1-202ENST00000605179 643 ntBASIC25.64■■□□□ 1.7
CLCN1P35523 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
CLCN1P35523 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CLCN1P35523 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.64■■□□□ 1.69
CLCN1P35523 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
CLCN1P35523 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC25.64■■□□□ 1.69
CLCN1P35523 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CLCN1P35523 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC25.63■■□□□ 1.69
CLCN1P35523 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CLCN1P35523 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CLCN1P35523 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.63■■□□□ 1.69
CLCN1P35523 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.63■■□□□ 1.69
CLCN1P35523 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CLCN1P35523 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CLCN1P35523 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.63■■□□□ 1.69
CLCN1P35523 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC25.63■■□□□ 1.69
CLCN1P35523 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CLCN1P35523 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CLCN1P35523 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CLCN1P35523 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
CLCN1P35523 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.62■■□□□ 1.69
CLCN1P35523 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
CLCN1P35523 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CLCN1P35523 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.62■■□□□ 1.69
CLCN1P35523 AC026202.3-201ENST00000600805 1127 ntBASIC25.62■■□□□ 1.69
CLCN1P35523 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CLCN1P35523 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms