Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 YDL085C-AYDL085C-A 207 nt5.76□□□□□ -1.49 RIP-Chip
PUB1P32588 BUG1YDL099W 1026 nt5.76□□□□□ -1.49
PUB1P32588 MIX14YDR031W 366 nt5.76□□□□□ -1.49
PUB1P32588 MRPL1YDR116C 858 nt5.76□□□□□ -1.49 RIP-Chip
PUB1P32588 NSA2YER126C 786 nt5.76□□□□□ -1.49 RIP-Chip
PUB1P32588 YFR009W-AYFR009W-A 258 nt5.76□□□□□ -1.49
PUB1P32588 MED6YHR058C 888 nt5.76□□□□□ -1.49
PUB1P32588 YIL047C-AYIL047C-A 369 nt5.76□□□□□ -1.49
PUB1P32588 POM33YLL023C 840 nt5.76□□□□□ -1.49 RIP-Chip
PUB1P32588 YML003WYML003W 873 nt5.76□□□□□ -1.49 RIP-Chip
PUB1P32588 RIM11YMR139W 1113 nt5.76□□□□□ -1.49 RIP-Chip
PUB1P32588 YMR158W-BYMR158W-B 321 nt5.76□□□□□ -1.49
PUB1P32588 YNL046WYNL046W 519 nt5.76□□□□□ -1.49 RIP-Chip
PUB1P32588 YNL058CYNL058C 951 nt5.76□□□□□ -1.49 RIP-Chip
PUB1P32588 YNL146WYNL146W 303 nt5.76□□□□□ -1.49
PUB1P32588 MVD1YNR043W 1191 nt5.76□□□□□ -1.49 RIP-Chip
PUB1P32588 PSH1YOL054W 1221 nt5.76□□□□□ -1.49
PUB1P32588 PEP4YPL154C 1218 nt5.76□□□□□ -1.49 RIP-Chip
PUB1P32588 GSH2YOL049W 1476 nt5.76□□□□□ -1.49
PUB1P32588 YGR054WYGR054W 1929 nt5.76□□□□□ -1.49 RIP-Chip
PUB1P32588 ART10YLR392C 1557 nt5.76□□□□□ -1.49
PUB1P32588 VMA2YBR127C 1554 nt5.76□□□□□ -1.49 RIP-Chip
PUB1P32588 ERG9YHR190W 1335 nt5.75□□□□□ -1.49
PUB1P32588 RDS2YPL133C 1341 nt5.75□□□□□ -1.49
PUB1P32588 MTC1YJL123C 1437 nt5.75□□□□□ -1.49
PUB1P32588 GPD1YDL022W 1176 nt5.75□□□□□ -1.49
PUB1P32588 YDR018CYDR018C 1191 nt5.75□□□□□ -1.49
PUB1P32588 MRPL35YDR322W 1104 nt5.75□□□□□ -1.49
PUB1P32588 MOB2YFL034C-B 864 nt5.75□□□□□ -1.49
PUB1P32588 YGR111WYGR111W 1203 nt5.75□□□□□ -1.49
PUB1P32588 YLR339CYLR339C 552 nt5.75□□□□□ -1.49
PUB1P32588 PNT1YOR266W 1272 nt5.75□□□□□ -1.49
PUB1P32588 YPL205CYPL205C 345 nt5.75□□□□□ -1.49
PUB1P32588 YPR172WYPR172W 603 nt5.75□□□□□ -1.49 RIP-Chip
PUB1P32588 TRP3YKL211C 1455 nt5.75□□□□□ -1.49
PUB1P32588 PPM1YDR435C 987 nt5.74□□□□□ -1.49
PUB1P32588 VMA3YEL027W 483 nt5.74□□□□□ -1.49
PUB1P32588 TDA10YGR205W 873 nt5.74□□□□□ -1.49 RIP-Chip
PUB1P32588 YIL115W-AYIL115W-A 372 nt5.74□□□□□ -1.49
PUB1P32588 YJL114WYJL114W 681 nt5.74□□□□□ -1.49
PUB1P32588 LCB3YJL134W 1230 nt5.74□□□□□ -1.49 RIP-Chip
PUB1P32588 RPS31YLR167W 459 nt5.74□□□□□ -1.49
PUB1P32588 YML053CYML053C 639 nt5.74□□□□□ -1.49
PUB1P32588 CCS1YMR038C 750 nt5.74□□□□□ -1.49
PUB1P32588 YOL013W-BYOL013W-B 291 nt5.74□□□□□ -1.49
PUB1P32588 YCL007CYCL007C 393 nt5.74□□□□□ -1.49
PUB1P32588 RIO1YOR119C 1455 nt5.74□□□□□ -1.49
PUB1P32588 APJ1YNL077W 1587 nt5.74□□□□□ -1.49 RIP-Chip
PUB1P32588 FMP40YPL222W 2067 nt5.74□□□□□ -1.49
PUB1P32588 RAP1YNL216W 2484 nt5.73□□□□□ -1.49
PUB1P32588 ATF1YOR377W 1578 nt5.73□□□□□ -1.49
PUB1P32588 SLM5YCR024C 1479 nt5.73□□□□□ -1.49
PUB1P32588 COS7YDL248W 1152 nt5.73□□□□□ -1.49 RIP-Chip
PUB1P32588 YGL262WYGL262W 528 nt5.73□□□□□ -1.49
PUB1P32588 LEU5YHR002W 1074 nt5.73□□□□□ -1.49
PUB1P32588 RPF1YHR088W 888 nt5.73□□□□□ -1.49
PUB1P32588 YHR173CYHR173C 339 nt5.73□□□□□ -1.49
PUB1P32588 YIL102C-AYIL102C-A 228 nt5.73□□□□□ -1.49
PUB1P32588 COS5YJR161C 1152 nt5.73□□□□□ -1.49 RIP-Chip
PUB1P32588 COQ9YLR201C 783 nt5.73□□□□□ -1.49 RIP-Chip
PUB1P32588 YMR030W-AYMR030W-A 291 nt5.73□□□□□ -1.49
PUB1P32588 YNL320WYNL320W 855 nt5.73□□□□□ -1.49 RIP-Chip
PUB1P32588 CTF19YPL018W 1110 nt5.73□□□□□ -1.49
PUB1P32588 YBR051WYBR051W 351 nt5.73□□□□□ -1.49
PUB1P32588 ECM31YBR176W 939 nt5.73□□□□□ -1.49
PUB1P32588 GRX1YCL035C 333 nt5.73□□□□□ -1.49
PUB1P32588 ARE2YNR019W 1929 nt5.73□□□□□ -1.49 RIP-Chip
PUB1P32588 SKI2YLR398C 3864 nt5.73□□□□□ -1.49
PUB1P32588 CRH1YGR189C 1524 nt5.73□□□□□ -1.49
PUB1P32588 RSC58YLR033W 1509 nt5.73□□□□□ -1.49
PUB1P32588 BUD22YMR014W 1560 nt5.72□□□□□ -1.49
PUB1P32588 MGA1YGR249W 1371 nt5.72□□□□□ -1.49 RIP-Chip
PUB1P32588 NUP42YDR192C 1293 nt5.72□□□□□ -1.49
PUB1P32588 GLE2YER107C 1098 nt5.72□□□□□ -1.49
PUB1P32588 COA1YIL157C 594 nt5.72□□□□□ -1.49 RIP-Chip
PUB1P32588 RPC17YJL011C 486 nt5.72□□□□□ -1.49
PUB1P32588 MRT4YKL009W 711 nt5.72□□□□□ -1.49
PUB1P32588 SWD2YKL018W 990 nt5.72□□□□□ -1.49 RIP-Chip
PUB1P32588 YKL153WYKL153W 510 nt5.72□□□□□ -1.49
PUB1P32588 MEH1YKR007W 555 nt5.72□□□□□ -1.49
PUB1P32588 GAT3YLR013W 426 nt5.72□□□□□ -1.49
PUB1P32588 YLR184WYLR184W 348 nt5.72□□□□□ -1.49
PUB1P32588 TEM1YML064C 738 nt5.72□□□□□ -1.49
PUB1P32588 SCS22YBL091C-A 528 nt5.72□□□□□ -1.49
PUB1P32588 PNO1YOR145C 825 nt5.72□□□□□ -1.49
PUB1P32588 FMP23YBR047W 528 nt5.72□□□□□ -1.49
PUB1P32588 YBR116CYBR116C 528 nt5.72□□□□□ -1.49
PUB1P32588 DEF1YKL054C 2217 nt5.72□□□□□ -1.49
PUB1P32588 TKL2YBR117C 2046 nt5.72□□□□□ -1.49
PUB1P32588 HRQ1YDR291W 3234 nt5.71□□□□□ -1.49
PUB1P32588 ATR1YML116W 1629 nt5.71□□□□□ -1.5 RIP-Chip
PUB1P32588 COX9YDL067C 180 nt5.71□□□□□ -1.5 RIP-Chip
PUB1P32588 INO2YDR123C 915 nt5.71□□□□□ -1.5
PUB1P32588 BIM1YER016W 1035 nt5.71□□□□□ -1.5
PUB1P32588 YFR032C-BYFR032C-B 264 nt5.71□□□□□ -1.5 RIP-Chip
PUB1P32588 ASF1YJL115W 840 nt5.71□□□□□ -1.5
PUB1P32588 YLR154W-FYLR154W-F 141 nt5.71□□□□□ -1.5
PUB1P32588 YML6YML025C 861 nt5.71□□□□□ -1.5
PUB1P32588 YOR199WYOR199W 330 nt5.71□□□□□ -1.5
PUB1P32588 SET4YJL105W 1683 nt5.71□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 38.9 ms