Protein–RNA interactions for Protein: P30939

HTR1F, 5-hydroxytryptamine receptor 1F, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1FP30939 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTR1FP30939 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
HTR1FP30939 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1FP30939 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HTR1FP30939 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1FP30939 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
HTR1FP30939 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1FP30939 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.31■□□□□ 0.84
HTR1FP30939 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1FP30939 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1FP30939 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1FP30939 AC127496.7-201ENST00000625110 1798 ntBASIC20.31■□□□□ 0.84
HTR1FP30939 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1FP30939 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR1FP30939 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1FP30939 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HTR1FP30939 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1FP30939 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.3■□□□□ 0.84
HTR1FP30939 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.3■□□□□ 0.84
HTR1FP30939 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1FP30939 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1FP30939 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1FP30939 SPCS2P3-201ENST00000500401 656 ntBASIC20.3■□□□□ 0.84
HTR1FP30939 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.3■□□□□ 0.84
HTR1FP30939 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
HTR1FP30939 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.3■□□□□ 0.84
HTR1FP30939 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1FP30939 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.3■□□□□ 0.84
HTR1FP30939 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1FP30939 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.3■□□□□ 0.84
HTR1FP30939 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1FP30939 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR1FP30939 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HTR1FP30939 ALDH1A3-203ENST00000557963 1670 ntBASIC20.29■□□□□ 0.84
HTR1FP30939 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.29■□□□□ 0.84
HTR1FP30939 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1FP30939 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.29■□□□□ 0.84
HTR1FP30939 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1FP30939 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
HTR1FP30939 MIR4449-201ENST00000578365 66 ntBASIC20.29■□□□□ 0.84
HTR1FP30939 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1FP30939 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1FP30939 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1FP30939 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1FP30939 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR1FP30939 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.28■□□□□ 0.84
HTR1FP30939 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1FP30939 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1FP30939 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1FP30939 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1FP30939 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
HTR1FP30939 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1FP30939 AL592293.1-201ENST00000502889 1188 ntBASIC20.28■□□□□ 0.84
HTR1FP30939 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HTR1FP30939 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.28■□□□□ 0.84
HTR1FP30939 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1FP30939 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1FP30939 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1FP30939 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1FP30939 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1FP30939 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1FP30939 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1FP30939 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1FP30939 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1FP30939 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR1FP30939 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
HTR1FP30939 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTR1FP30939 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.27■□□□□ 0.84
HTR1FP30939 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
HTR1FP30939 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HTR1FP30939 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTR1FP30939 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
HTR1FP30939 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
HTR1FP30939 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HTR1FP30939 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HTR1FP30939 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.26■□□□□ 0.83
HTR1FP30939 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1FP30939 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.26■□□□□ 0.83
HTR1FP30939 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.26■□□□□ 0.83
HTR1FP30939 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HTR1FP30939 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1FP30939 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1FP30939 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.26■□□□□ 0.83
HTR1FP30939 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
HTR1FP30939 MIR6765-201ENST00000614092 87 ntBASIC20.26■□□□□ 0.83
HTR1FP30939 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.26■□□□□ 0.83
HTR1FP30939 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1FP30939 AC131274.2-201ENST00000580697 1507 ntBASIC20.26■□□□□ 0.83
HTR1FP30939 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR1FP30939 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.25■□□□□ 0.83
HTR1FP30939 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HTR1FP30939 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HTR1FP30939 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HTR1FP30939 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.25■□□□□ 0.83
HTR1FP30939 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTR1FP30939 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HTR1FP30939 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.24■□□□□ 0.83
HTR1FP30939 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1FP30939 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR1FP30939 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms