Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.82■■□□□ 1.4
RARAP10276 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.82■■□□□ 1.4
RARAP10276 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RARAP10276 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RARAP10276 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RARAP10276 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.82■■□□□ 1.4
RARAP10276 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RARAP10276 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RARAP10276 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RARAP10276 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RARAP10276 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RARAP10276 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RARAP10276 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.81■■□□□ 1.4
RARAP10276 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RARAP10276 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RARAP10276 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RARAP10276 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.8■■□□□ 1.4
RARAP10276 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RARAP10276 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RARAP10276 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
RARAP10276 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RARAP10276 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RARAP10276 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RARAP10276 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RARAP10276 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RARAP10276 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.79■■□□□ 1.4
RARAP10276 AL031848.2-201ENST00000607670 837 ntBASIC23.79■■□□□ 1.4
RARAP10276 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RARAP10276 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.79■■□□□ 1.4
RARAP10276 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RARAP10276 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RARAP10276 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RARAP10276 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RARAP10276 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
RARAP10276 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RARAP10276 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.78■■□□□ 1.4
RARAP10276 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RARAP10276 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.78■■□□□ 1.4
RARAP10276 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.78■■□□□ 1.4
RARAP10276 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.78■■□□□ 1.4
RARAP10276 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RARAP10276 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.78■■□□□ 1.4
RARAP10276 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RARAP10276 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.77■■□□□ 1.4
RARAP10276 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.77■■□□□ 1.4
RARAP10276 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.77■■□□□ 1.4
RARAP10276 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.77■■□□□ 1.4
RARAP10276 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RARAP10276 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RARAP10276 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.77■■□□□ 1.4
RARAP10276 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RARAP10276 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.77■■□□□ 1.4
RARAP10276 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RARAP10276 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.77■■□□□ 1.4
RARAP10276 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RARAP10276 ALDH1A3-203ENST00000557963 1670 ntBASIC23.76■■□□□ 1.39
RARAP10276 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
RARAP10276 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
RARAP10276 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RARAP10276 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RARAP10276 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RARAP10276 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
RARAP10276 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RARAP10276 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RARAP10276 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
RARAP10276 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.75■■□□□ 1.39
RARAP10276 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RARAP10276 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.75■■□□□ 1.39
RARAP10276 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RARAP10276 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RARAP10276 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RARAP10276 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RARAP10276 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RARAP10276 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
RARAP10276 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
RARAP10276 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RARAP10276 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
RARAP10276 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
RARAP10276 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RARAP10276 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.74■■□□□ 1.39
RARAP10276 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.74■■□□□ 1.39
RARAP10276 AC004448.1-201ENST00000458332 883 ntBASIC23.74■■□□□ 1.39
RARAP10276 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.74■■□□□ 1.39
RARAP10276 AC137630.3-201ENST00000607245 391 ntBASIC23.74■■□□□ 1.39
RARAP10276 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.74■■□□□ 1.39
RARAP10276 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RARAP10276 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RARAP10276 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RARAP10276 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RARAP10276 AC092068.2-201ENST00000590491 1708 ntBASIC23.73■■□□□ 1.39
RARAP10276 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
RARAP10276 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RARAP10276 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RARAP10276 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RARAP10276 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RARAP10276 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RARAP10276 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.72■■□□□ 1.39
RARAP10276 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RARAP10276 DUSP8P3-201ENST00000399571 1760 ntBASIC23.72■■□□□ 1.39
RARAP10276 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms