Protein–RNA interactions for Protein: P0C860

MSL3P1, Putative male-specific lethal-3 protein-like 2, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3P1P0C860 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
MSL3P1P0C860 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
MSL3P1P0C860 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MSL3P1P0C860 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MSL3P1P0C860 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MSL3P1P0C860 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.76■■□□□ 1.07
MSL3P1P0C860 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MSL3P1P0C860 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.76■■□□□ 1.07
MSL3P1P0C860 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.76■■□□□ 1.07
MSL3P1P0C860 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
MSL3P1P0C860 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
MSL3P1P0C860 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
MSL3P1P0C860 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
MSL3P1P0C860 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MSL3P1P0C860 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MSL3P1P0C860 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MSL3P1P0C860 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSL3P1P0C860 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSL3P1P0C860 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSL3P1P0C860 AC096631.2-201ENST00000436136 790 ntBASIC21.75■■□□□ 1.07
MSL3P1P0C860 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
MSL3P1P0C860 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
MSL3P1P0C860 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MSL3P1P0C860 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MSL3P1P0C860 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MSL3P1P0C860 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MSL3P1P0C860 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.74■■□□□ 1.07
MSL3P1P0C860 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.74■■□□□ 1.07
MSL3P1P0C860 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSL3P1P0C860 DUX4L19-201ENST00000557448 1267 ntBASIC21.74■■□□□ 1.07
MSL3P1P0C860 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSL3P1P0C860 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
MSL3P1P0C860 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSL3P1P0C860 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MSL3P1P0C860 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
MSL3P1P0C860 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MSL3P1P0C860 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.74■■□□□ 1.07
MSL3P1P0C860 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.73■■□□□ 1.07
MSL3P1P0C860 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
MSL3P1P0C860 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSL3P1P0C860 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSL3P1P0C860 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
MSL3P1P0C860 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MSL3P1P0C860 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.73■■□□□ 1.07
MSL3P1P0C860 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MSL3P1P0C860 AC092171.4-201ENST00000609130 632 ntBASIC21.73■■□□□ 1.07
MSL3P1P0C860 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.73■■□□□ 1.07
MSL3P1P0C860 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MSL3P1P0C860 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
MSL3P1P0C860 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.72■■□□□ 1.07
MSL3P1P0C860 ALDH1A3-203ENST00000557963 1670 ntBASIC21.72■■□□□ 1.07
MSL3P1P0C860 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.72■■□□□ 1.07
MSL3P1P0C860 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.72■■□□□ 1.07
MSL3P1P0C860 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MSL3P1P0C860 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.72■■□□□ 1.07
MSL3P1P0C860 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MSL3P1P0C860 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MSL3P1P0C860 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.72■■□□□ 1.07
MSL3P1P0C860 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.72■■□□□ 1.07
MSL3P1P0C860 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MSL3P1P0C860 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MSL3P1P0C860 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.72■■□□□ 1.07
MSL3P1P0C860 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MSL3P1P0C860 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MSL3P1P0C860 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MSL3P1P0C860 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.71■■□□□ 1.07
MSL3P1P0C860 AC106739.1-201ENST00000617035 715 ntBASIC21.71■■□□□ 1.07
MSL3P1P0C860 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MSL3P1P0C860 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
MSL3P1P0C860 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.71■■□□□ 1.07
MSL3P1P0C860 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
MSL3P1P0C860 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSL3P1P0C860 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.7■■□□□ 1.06
MSL3P1P0C860 AC009102.2-201ENST00000606772 1639 ntBASIC21.7■■□□□ 1.06
MSL3P1P0C860 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.7■■□□□ 1.06
MSL3P1P0C860 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSL3P1P0C860 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSL3P1P0C860 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.7■■□□□ 1.06
MSL3P1P0C860 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSL3P1P0C860 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MSL3P1P0C860 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.7■■□□□ 1.06
MSL3P1P0C860 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MSL3P1P0C860 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MSL3P1P0C860 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MSL3P1P0C860 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MSL3P1P0C860 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MSL3P1P0C860 AC138932.3-201ENST00000567634 1902 ntBASIC21.69■■□□□ 1.06
MSL3P1P0C860 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
MSL3P1P0C860 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.69■■□□□ 1.06
MSL3P1P0C860 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
MSL3P1P0C860 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MSL3P1P0C860 C17orf82-201ENST00000623772 1530 ntBASIC21.69■■□□□ 1.06
MSL3P1P0C860 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
MSL3P1P0C860 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MSL3P1P0C860 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.69■■□□□ 1.06
MSL3P1P0C860 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
MSL3P1P0C860 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
MSL3P1P0C860 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MSL3P1P0C860 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.68■■□□□ 1.06
MSL3P1P0C860 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms