Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FREM3P0C091 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FREM3P0C091 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.67■□□□□ 0.9
FREM3P0C091 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FREM3P0C091 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FREM3P0C091 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FREM3P0C091 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
FREM3P0C091 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FREM3P0C091 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FREM3P0C091 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FREM3P0C091 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.66■□□□□ 0.9
FREM3P0C091 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.66■□□□□ 0.9
FREM3P0C091 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FREM3P0C091 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FREM3P0C091 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FREM3P0C091 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FREM3P0C091 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FREM3P0C091 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.66■□□□□ 0.9
FREM3P0C091 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
FREM3P0C091 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.66■□□□□ 0.9
FREM3P0C091 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FREM3P0C091 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FREM3P0C091 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
FREM3P0C091 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FREM3P0C091 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.65■□□□□ 0.9
FREM3P0C091 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FREM3P0C091 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FREM3P0C091 ABCB10P4-201ENST00000566803 2184 ntBASIC20.65■□□□□ 0.9
FREM3P0C091 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FREM3P0C091 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FREM3P0C091 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.65■□□□□ 0.9
FREM3P0C091 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FREM3P0C091 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
FREM3P0C091 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
FREM3P0C091 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
FREM3P0C091 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
FREM3P0C091 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FREM3P0C091 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.64■□□□□ 0.89
FREM3P0C091 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FREM3P0C091 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
FREM3P0C091 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
FREM3P0C091 AC004812.2-201ENST00000611079 2094 ntBASIC20.63■□□□□ 0.89
FREM3P0C091 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
FREM3P0C091 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FREM3P0C091 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FREM3P0C091 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FREM3P0C091 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.63■□□□□ 0.89
FREM3P0C091 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
FREM3P0C091 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FREM3P0C091 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
FREM3P0C091 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FREM3P0C091 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FREM3P0C091 AC141586.4-201ENST00000624558 1573 ntBASIC20.62■□□□□ 0.89
FREM3P0C091 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.62■□□□□ 0.89
FREM3P0C091 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
FREM3P0C091 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.62■□□□□ 0.89
FREM3P0C091 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FREM3P0C091 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FREM3P0C091 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FREM3P0C091 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FREM3P0C091 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FREM3P0C091 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
FREM3P0C091 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FREM3P0C091 C17orf82-201ENST00000623772 1530 ntBASIC20.61■□□□□ 0.89
FREM3P0C091 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
FREM3P0C091 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
FREM3P0C091 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FREM3P0C091 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
FREM3P0C091 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FREM3P0C091 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FREM3P0C091 AC096631.2-201ENST00000436136 790 ntBASIC20.61■□□□□ 0.89
FREM3P0C091 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.61■□□□□ 0.89
FREM3P0C091 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FREM3P0C091 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FREM3P0C091 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FREM3P0C091 MIR638-201ENST00000385237 100 ntBASIC20.6■□□□□ 0.89
FREM3P0C091 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.6■□□□□ 0.89
FREM3P0C091 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.6■□□□□ 0.89
FREM3P0C091 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FREM3P0C091 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FREM3P0C091 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
FREM3P0C091 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FREM3P0C091 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
FREM3P0C091 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FREM3P0C091 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.59■□□□□ 0.89
FREM3P0C091 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FREM3P0C091 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FREM3P0C091 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FREM3P0C091 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.59■□□□□ 0.89
FREM3P0C091 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.59■□□□□ 0.89
FREM3P0C091 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
FREM3P0C091 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FREM3P0C091 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
FREM3P0C091 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FREM3P0C091 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FREM3P0C091 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FREM3P0C091 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
FREM3P0C091 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
FREM3P0C091 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FREM3P0C091 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms