Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.24■■□□□ 1.31
COL4A2P08572 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
COL4A2P08572 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
COL4A2P08572 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
COL4A2P08572 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.23■■□□□ 1.31
COL4A2P08572 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.23■■□□□ 1.31
COL4A2P08572 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.23■■□□□ 1.31
COL4A2P08572 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.23■■□□□ 1.31
COL4A2P08572 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL4A2P08572 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
COL4A2P08572 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL4A2P08572 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
COL4A2P08572 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL4A2P08572 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
COL4A2P08572 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
COL4A2P08572 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
COL4A2P08572 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.22■■□□□ 1.31
COL4A2P08572 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.22■■□□□ 1.31
COL4A2P08572 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL4A2P08572 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL4A2P08572 TSPY26P-201ENST00000476365 1326 ntBASIC23.22■■□□□ 1.31
COL4A2P08572 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.22■■□□□ 1.31
COL4A2P08572 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL4A2P08572 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL4A2P08572 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
COL4A2P08572 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL4A2P08572 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.22■■□□□ 1.31
COL4A2P08572 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL4A2P08572 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL4A2P08572 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.21■■□□□ 1.31
COL4A2P08572 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL4A2P08572 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL4A2P08572 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL4A2P08572 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.2■■□□□ 1.3
COL4A2P08572 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL4A2P08572 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.3
COL4A2P08572 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.2■■□□□ 1.3
COL4A2P08572 IGHV3-19-201ENST00000521488 291 ntBASIC23.2■■□□□ 1.3
COL4A2P08572 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.2■■□□□ 1.3
COL4A2P08572 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.2■■□□□ 1.3
COL4A2P08572 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
COL4A2P08572 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL4A2P08572 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL4A2P08572 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.19■■□□□ 1.3
COL4A2P08572 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
COL4A2P08572 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL4A2P08572 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL4A2P08572 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL4A2P08572 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.19■■□□□ 1.3
COL4A2P08572 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.19■■□□□ 1.3
COL4A2P08572 AC126544.1-201ENST00000580842 1059 ntBASIC23.19■■□□□ 1.3
COL4A2P08572 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
COL4A2P08572 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
COL4A2P08572 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL4A2P08572 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL4A2P08572 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL4A2P08572 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL4A2P08572 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.17■■□□□ 1.3
COL4A2P08572 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL4A2P08572 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.17■■□□□ 1.3
COL4A2P08572 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.17■■□□□ 1.3
COL4A2P08572 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.17■■□□□ 1.3
COL4A2P08572 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL4A2P08572 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.17■■□□□ 1.3
COL4A2P08572 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.17■■□□□ 1.3
COL4A2P08572 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL4A2P08572 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL4A2P08572 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.16■■□□□ 1.3
COL4A2P08572 AC022517.1-201ENST00000592429 346 ntBASIC23.16■■□□□ 1.3
COL4A2P08572 pRNA.6-201ENST00000610482 90 ntBASIC23.16■■□□□ 1.3
COL4A2P08572 pRNA.5-201ENST00000612139 90 ntBASIC23.16■■□□□ 1.3
COL4A2P08572 pRNA.11-201ENST00000618423 90 ntBASIC23.16■■□□□ 1.3
COL4A2P08572 pRNA.13-201ENST00000619112 90 ntBASIC23.16■■□□□ 1.3
COL4A2P08572 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL4A2P08572 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL4A2P08572 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL4A2P08572 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.16■■□□□ 1.3
COL4A2P08572 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL4A2P08572 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.16■■□□□ 1.3
COL4A2P08572 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.16■■□□□ 1.3
COL4A2P08572 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.16■■□□□ 1.3
COL4A2P08572 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.16■■□□□ 1.3
COL4A2P08572 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL4A2P08572 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL4A2P08572 AL161729.1-201ENST00000604104 1402 ntBASIC23.15■■□□□ 1.3
COL4A2P08572 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.15■■□□□ 1.3
COL4A2P08572 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.15■■□□□ 1.3
COL4A2P08572 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL4A2P08572 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL4A2P08572 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.15■■□□□ 1.3
COL4A2P08572 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
COL4A2P08572 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.15■■□□□ 1.3
COL4A2P08572 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL4A2P08572 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL4A2P08572 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.15■■□□□ 1.3
COL4A2P08572 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL4A2P08572 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.14■■□□□ 1.3
COL4A2P08572 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL4A2P08572 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.14■■□□□ 1.3
COL4A2P08572 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms