Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRAP04437 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.25■□□□□ 0.35
TCRAP04437 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.25■□□□□ 0.35
TCRAP04437 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRAP04437 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.25■□□□□ 0.35
TCRAP04437 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.25■□□□□ 0.35
TCRAP04437 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRAP04437 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
TCRAP04437 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRAP04437 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRAP04437 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
TCRAP04437 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TCRAP04437 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRAP04437 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TCRAP04437 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRAP04437 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRAP04437 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TCRAP04437 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRAP04437 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRAP04437 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TCRAP04437 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
TCRAP04437 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TCRAP04437 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRAP04437 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TCRAP04437 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRAP04437 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRAP04437 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.23■□□□□ 0.35
TCRAP04437 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TCRAP04437 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRAP04437 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRAP04437 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRAP04437 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TCRAP04437 AC137767.1-201ENST00000602918 1920 ntBASIC17.23■□□□□ 0.35
TCRAP04437 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRAP04437 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TCRAP04437 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRAP04437 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TCRAP04437 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TCRAP04437 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TCRAP04437 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRAP04437 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TCRAP04437 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.22■□□□□ 0.35
TCRAP04437 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TCRAP04437 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.22■□□□□ 0.35
TCRAP04437 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.22■□□□□ 0.35
TCRAP04437 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRAP04437 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRAP04437 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRAP04437 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRAP04437 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRAP04437 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRAP04437 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TCRAP04437 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.21■□□□□ 0.35
TCRAP04437 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRAP04437 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRAP04437 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRAP04437 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.21■□□□□ 0.35
TCRAP04437 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.21■□□□□ 0.35
TCRAP04437 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRAP04437 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.21■□□□□ 0.35
TCRAP04437 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.21■□□□□ 0.35
TCRAP04437 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRAP04437 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TCRAP04437 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TCRAP04437 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
TCRAP04437 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.2■□□□□ 0.34
TCRAP04437 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.2■□□□□ 0.34
TCRAP04437 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.2■□□□□ 0.34
TCRAP04437 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.2■□□□□ 0.34
TCRAP04437 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.2■□□□□ 0.34
TCRAP04437 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.2■□□□□ 0.34
TCRAP04437 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
TCRAP04437 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.2■□□□□ 0.34
TCRAP04437 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRAP04437 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TCRAP04437 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRAP04437 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRAP04437 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TCRAP04437 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TCRAP04437 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRAP04437 AL022069.1-201ENST00000568025 1636 ntBASIC17.19■□□□□ 0.34
TCRAP04437 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TCRAP04437 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms