Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBP04114 NKILA-201ENST00000613231 537 ntTSL 4 BASIC14.42□□□□□ -0.1
APOBP04114 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOBP04114 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOBP04114 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBP04114 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.42□□□□□ -0.1
APOBP04114 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.42□□□□□ -0.1
APOBP04114 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.42□□□□□ -0.1
APOBP04114 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.42□□□□□ -0.1
APOBP04114 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC14.42□□□□□ -0.1
APOBP04114 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBP04114 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
APOBP04114 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC14.41□□□□□ -0.1
APOBP04114 AC066615.1-201ENST00000640911 628 ntBASIC14.41□□□□□ -0.1
APOBP04114 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOBP04114 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.41□□□□□ -0.1
APOBP04114 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.41□□□□□ -0.1
APOBP04114 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.41□□□□□ -0.1
APOBP04114 AP005435.1-201ENST00000529293 1178 ntBASIC14.41□□□□□ -0.1
APOBP04114 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOBP04114 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOBP04114 VGF-203ENST00000611537 1622 ntTSL 5 BASIC14.41□□□□□ -0.1
APOBP04114 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC14.41□□□□□ -0.1
APOBP04114 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
APOBP04114 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.41□□□□□ -0.1
APOBP04114 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
APOBP04114 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.4□□□□□ -0.1
APOBP04114 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
APOBP04114 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBP04114 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBP04114 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBP04114 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOBP04114 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.4□□□□□ -0.1
APOBP04114 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC14.4□□□□□ -0.1
APOBP04114 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBP04114 AC073111.5-205ENST00000641717 521 ntBASIC14.4□□□□□ -0.1
APOBP04114 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.4□□□□□ -0.1
APOBP04114 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBP04114 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOBP04114 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
APOBP04114 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBP04114 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
APOBP04114 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOBP04114 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOBP04114 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOBP04114 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
APOBP04114 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.39□□□□□ -0.11
APOBP04114 NTF6G-201ENST00000591094 616 ntBASIC14.39□□□□□ -0.11
APOBP04114 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.39□□□□□ -0.11
APOBP04114 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOBP04114 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC14.39□□□□□ -0.11
APOBP04114 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.39□□□□□ -0.11
APOBP04114 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.39□□□□□ -0.11
APOBP04114 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
APOBP04114 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOBP04114 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOBP04114 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.39□□□□□ -0.11
APOBP04114 AC097639.1-201ENST00000565519 1891 ntBASIC14.39□□□□□ -0.11
APOBP04114 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOBP04114 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBP04114 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBP04114 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC14.38□□□□□ -0.11
APOBP04114 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.38□□□□□ -0.11
APOBP04114 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
APOBP04114 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOBP04114 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBP04114 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBP04114 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
APOBP04114 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBP04114 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC14.38□□□□□ -0.11
APOBP04114 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
APOBP04114 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBP04114 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBP04114 AC080038.1-201ENST00000611274 1154 ntBASIC14.37□□□□□ -0.11
APOBP04114 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOBP04114 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC14.37□□□□□ -0.11
APOBP04114 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.37□□□□□ -0.11
APOBP04114 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBP04114 SHF-208ENST00000560734 1731 ntTSL 3 BASIC14.37□□□□□ -0.11
APOBP04114 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.37□□□□□ -0.11
APOBP04114 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.37□□□□□ -0.11
APOBP04114 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
APOBP04114 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
APOBP04114 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.37□□□□□ -0.11
APOBP04114 AC008687.6-201ENST00000596318 630 ntBASIC14.37□□□□□ -0.11
APOBP04114 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
APOBP04114 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.36□□□□□ -0.11
APOBP04114 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
APOBP04114 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOBP04114 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC14.36□□□□□ -0.11
APOBP04114 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.36□□□□□ -0.11
APOBP04114 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOBP04114 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
APOBP04114 IGHV3-19-201ENST00000521488 291 ntBASIC14.36□□□□□ -0.11
APOBP04114 AC092171.4-201ENST00000609130 632 ntBASIC14.36□□□□□ -0.11
APOBP04114 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOBP04114 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOBP04114 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC14.36□□□□□ -0.11
APOBP04114 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
APOBP04114 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms