Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA1O95477 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA1O95477 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA1O95477 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA1O95477 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ABCA1O95477 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.93■□□□□ 0.62
ABCA1O95477 AC092171.4-201ENST00000609130 632 ntBASIC18.93■□□□□ 0.62
ABCA1O95477 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.93■□□□□ 0.62
ABCA1O95477 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.92■□□□□ 0.62
ABCA1O95477 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA1O95477 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA1O95477 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.92■□□□□ 0.62
ABCA1O95477 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
ABCA1O95477 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.92■□□□□ 0.62
ABCA1O95477 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.92■□□□□ 0.62
ABCA1O95477 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA1O95477 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
ABCA1O95477 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA1O95477 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA1O95477 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA1O95477 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ABCA1O95477 AC131274.2-201ENST00000580697 1507 ntBASIC18.92■□□□□ 0.62
ABCA1O95477 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.91■□□□□ 0.62
ABCA1O95477 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.91■□□□□ 0.62
ABCA1O95477 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.91■□□□□ 0.62
ABCA1O95477 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA1O95477 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA1O95477 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
ABCA1O95477 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA1O95477 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ABCA1O95477 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA1O95477 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ABCA1O95477 AC006455.2-201ENST00000429931 906 ntBASIC18.91■□□□□ 0.62
ABCA1O95477 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.91■□□□□ 0.62
ABCA1O95477 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA1O95477 AC092437.1-201ENST00000624794 1048 ntBASIC18.91■□□□□ 0.62
ABCA1O95477 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA1O95477 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA1O95477 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ABCA1O95477 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA1O95477 AC233992.3-201ENST00000607491 485 ntBASIC18.9■□□□□ 0.62
ABCA1O95477 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA1O95477 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA1O95477 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA1O95477 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA1O95477 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
ABCA1O95477 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA1O95477 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA1O95477 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA1O95477 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.9■□□□□ 0.62
ABCA1O95477 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA1O95477 DUX4L2-201ENST00000561772 1275 ntBASIC18.9■□□□□ 0.62
ABCA1O95477 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.9■□□□□ 0.62
ABCA1O95477 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.9■□□□□ 0.62
ABCA1O95477 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
ABCA1O95477 DUX4L6-201ENST00000626483 1275 ntBASIC18.9■□□□□ 0.62
ABCA1O95477 DUX4L1-201ENST00000627662 1275 ntBASIC18.9■□□□□ 0.62
ABCA1O95477 DUX4L8-201ENST00000629013 1275 ntBASIC18.9■□□□□ 0.62
ABCA1O95477 DUX4L3-201ENST00000630187 1275 ntBASIC18.9■□□□□ 0.62
ABCA1O95477 DUX4L7-201ENST00000630678 1275 ntBASIC18.9■□□□□ 0.62
ABCA1O95477 DUX4L5-201ENST00000630834 1275 ntBASIC18.9■□□□□ 0.62
ABCA1O95477 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.9■□□□□ 0.62
ABCA1O95477 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA1O95477 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.89■□□□□ 0.62
ABCA1O95477 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ABCA1O95477 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.89■□□□□ 0.61
ABCA1O95477 BX842568.3-201ENST00000418104 571 ntBASIC18.89■□□□□ 0.61
ABCA1O95477 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.89■□□□□ 0.61
ABCA1O95477 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.89■□□□□ 0.61
ABCA1O95477 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA1O95477 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
ABCA1O95477 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.89■□□□□ 0.61
ABCA1O95477 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA1O95477 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA1O95477 DUSP8P4-201ENST00000399538 1761 ntBASIC18.89■□□□□ 0.61
ABCA1O95477 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.89■□□□□ 0.61
ABCA1O95477 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA1O95477 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA1O95477 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.89■□□□□ 0.61
ABCA1O95477 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ABCA1O95477 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ABCA1O95477 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA1O95477 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.88■□□□□ 0.61
ABCA1O95477 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA1O95477 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA1O95477 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.88■□□□□ 0.61
ABCA1O95477 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA1O95477 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCA1O95477 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.88■□□□□ 0.61
ABCA1O95477 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA1O95477 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA1O95477 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA1O95477 AC241377.3-202ENST00000626088 1088 ntBASIC18.88■□□□□ 0.61
ABCA1O95477 AC241585.3-202ENST00000628937 1088 ntBASIC18.88■□□□□ 0.61
ABCA1O95477 AC245100.8-202ENST00000629247 1058 ntBASIC18.88■□□□□ 0.61
ABCA1O95477 AL031602.1-201ENST00000633169 911 ntBASIC18.88■□□□□ 0.61
ABCA1O95477 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.87■□□□□ 0.61
ABCA1O95477 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
ABCA1O95477 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ABCA1O95477 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms