Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
RAPGEF3O95398 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC34.7■■■■□ 3.15
RAPGEF3O95398 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC34.7■■■■□ 3.15
RAPGEF3O95398 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
RAPGEF3O95398 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC34.7■■■■□ 3.15
RAPGEF3O95398 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC34.7■■■■□ 3.15
RAPGEF3O95398 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC34.7■■■■□ 3.15
RAPGEF3O95398 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
RAPGEF3O95398 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC34.69■■■■□ 3.14
RAPGEF3O95398 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
RAPGEF3O95398 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC34.69■■■■□ 3.14
RAPGEF3O95398 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC34.69■■■■□ 3.14
RAPGEF3O95398 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC34.69■■■■□ 3.14
RAPGEF3O95398 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC34.69■■■■□ 3.14
RAPGEF3O95398 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC34.69■■■■□ 3.14
RAPGEF3O95398 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC34.69■■■■□ 3.14
RAPGEF3O95398 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
RAPGEF3O95398 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
RAPGEF3O95398 AC006015.1-201ENST00000429970 570 ntBASIC34.68■■■■□ 3.14
RAPGEF3O95398 AC104771.1-201ENST00000603335 964 ntBASIC34.68■■■■□ 3.14
RAPGEF3O95398 LINC02228-203ENST00000641970 1355 ntBASIC34.68■■■■□ 3.14
RAPGEF3O95398 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC34.67■■■■□ 3.14
RAPGEF3O95398 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC34.67■■■■□ 3.14
RAPGEF3O95398 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC34.67■■■■□ 3.14
RAPGEF3O95398 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
RAPGEF3O95398 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC34.67■■■■□ 3.14
RAPGEF3O95398 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
RAPGEF3O95398 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC34.67■■■■□ 3.14
RAPGEF3O95398 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC34.67■■■■□ 3.14
RAPGEF3O95398 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC34.66■■■■□ 3.14
RAPGEF3O95398 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
RAPGEF3O95398 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC34.66■■■■□ 3.14
RAPGEF3O95398 AC073111.5-205ENST00000641717 521 ntBASIC34.66■■■■□ 3.14
RAPGEF3O95398 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC34.65■■■■□ 3.14
RAPGEF3O95398 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC34.65■■■■□ 3.14
RAPGEF3O95398 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC34.65■■■■□ 3.14
RAPGEF3O95398 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC34.65■■■■□ 3.14
RAPGEF3O95398 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
RAPGEF3O95398 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC34.64■■■■□ 3.14
RAPGEF3O95398 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
RAPGEF3O95398 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
RAPGEF3O95398 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
RAPGEF3O95398 MAP2K4P1-201ENST00000438453 1195 ntBASIC34.63■■■■□ 3.13
RAPGEF3O95398 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
RAPGEF3O95398 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC34.63■■■■□ 3.13
RAPGEF3O95398 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
RAPGEF3O95398 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
RAPGEF3O95398 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
RAPGEF3O95398 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC34.62■■■■□ 3.13
RAPGEF3O95398 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
RAPGEF3O95398 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
RAPGEF3O95398 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC34.62■■■■□ 3.13
RAPGEF3O95398 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC34.62■■■■□ 3.13
RAPGEF3O95398 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC34.62■■■■□ 3.13
RAPGEF3O95398 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
RAPGEF3O95398 TMEM191A-211ENST00000637163 1067 ntBASIC34.62■■■■□ 3.13
RAPGEF3O95398 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC34.62■■■■□ 3.13
RAPGEF3O95398 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC34.61■■■■□ 3.13
RAPGEF3O95398 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC34.61■■■■□ 3.13
RAPGEF3O95398 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC34.61■■■■□ 3.13
RAPGEF3O95398 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC34.61■■■■□ 3.13
RAPGEF3O95398 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC34.61■■■■□ 3.13
RAPGEF3O95398 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC34.6■■■■□ 3.13
RAPGEF3O95398 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC34.6■■■■□ 3.13
RAPGEF3O95398 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
RAPGEF3O95398 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC34.6■■■■□ 3.13
RAPGEF3O95398 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
RAPGEF3O95398 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC34.59■■■■□ 3.13
RAPGEF3O95398 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC34.59■■■■□ 3.13
RAPGEF3O95398 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
RAPGEF3O95398 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
RAPGEF3O95398 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC34.59■■■■□ 3.13
RAPGEF3O95398 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
RAPGEF3O95398 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
RAPGEF3O95398 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC34.58■■■■□ 3.13
RAPGEF3O95398 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC34.58■■■■□ 3.13
RAPGEF3O95398 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC34.58■■■■□ 3.13
RAPGEF3O95398 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC34.58■■■■□ 3.13
RAPGEF3O95398 PPP1R14BP3-201ENST00000509033 445 ntBASIC34.58■■■■□ 3.13
RAPGEF3O95398 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
RAPGEF3O95398 AC066615.1-201ENST00000640911 628 ntBASIC34.58■■■■□ 3.13
RAPGEF3O95398 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC34.57■■■■□ 3.13
RAPGEF3O95398 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC34.57■■■■□ 3.12
RAPGEF3O95398 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC34.57■■■■□ 3.12
RAPGEF3O95398 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC34.57■■■■□ 3.12
RAPGEF3O95398 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC34.57■■■■□ 3.12
RAPGEF3O95398 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
RAPGEF3O95398 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC34.57■■■■□ 3.12
RAPGEF3O95398 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
RAPGEF3O95398 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
RAPGEF3O95398 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC34.56■■■■□ 3.12
RAPGEF3O95398 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC34.56■■■■□ 3.12
RAPGEF3O95398 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC34.56■■■■□ 3.12
RAPGEF3O95398 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC34.56■■■■□ 3.12
RAPGEF3O95398 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC34.55■■■■□ 3.12
RAPGEF3O95398 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
RAPGEF3O95398 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC34.55■■■■□ 3.12
RAPGEF3O95398 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
RAPGEF3O95398 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC34.55■■■■□ 3.12
RAPGEF3O95398 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC34.55■■■■□ 3.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms