Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX4O95219 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX4O95219 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX4O95219 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX4O95219 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX4O95219 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX4O95219 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
SNX4O95219 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX4O95219 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
SNX4O95219 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SNX4O95219 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.13■□□□□ 0.97
SNX4O95219 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.13■□□□□ 0.97
SNX4O95219 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.13■□□□□ 0.97
SNX4O95219 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.13■□□□□ 0.97
SNX4O95219 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.13■□□□□ 0.97
SNX4O95219 MTDHP2-201ENST00000601468 714 ntBASIC21.13■□□□□ 0.97
SNX4O95219 AC010997.5-201ENST00000609182 354 ntBASIC21.13■□□□□ 0.97
SNX4O95219 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNX4O95219 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SNX4O95219 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX4O95219 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX4O95219 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX4O95219 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX4O95219 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNX4O95219 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNX4O95219 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.12■□□□□ 0.97
SNX4O95219 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.12■□□□□ 0.97
SNX4O95219 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SNX4O95219 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SNX4O95219 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNX4O95219 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.12■□□□□ 0.97
SNX4O95219 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.12■□□□□ 0.97
SNX4O95219 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNX4O95219 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNX4O95219 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNX4O95219 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNX4O95219 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNX4O95219 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNX4O95219 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNX4O95219 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SNX4O95219 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.11■□□□□ 0.97
SNX4O95219 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNX4O95219 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.11■□□□□ 0.97
SNX4O95219 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNX4O95219 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNX4O95219 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.1■□□□□ 0.97
SNX4O95219 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SNX4O95219 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SNX4O95219 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.1■□□□□ 0.97
SNX4O95219 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.1■□□□□ 0.97
SNX4O95219 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNX4O95219 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.1■□□□□ 0.97
SNX4O95219 SNX5-217ENST00000606557 1087 ntBASIC21.1■□□□□ 0.97
SNX4O95219 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SNX4O95219 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNX4O95219 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNX4O95219 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SNX4O95219 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.09■□□□□ 0.97
SNX4O95219 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.09■□□□□ 0.97
SNX4O95219 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNX4O95219 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SNX4O95219 AC004448.1-201ENST00000458332 883 ntBASIC21.09■□□□□ 0.97
SNX4O95219 MIR6722-201ENST00000617286 78 ntBASIC21.09■□□□□ 0.97
SNX4O95219 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.09■□□□□ 0.97
SNX4O95219 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.09■□□□□ 0.97
SNX4O95219 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SNX4O95219 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SNX4O95219 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.08■□□□□ 0.97
SNX4O95219 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.08■□□□□ 0.97
SNX4O95219 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.08■□□□□ 0.97
SNX4O95219 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.08■□□□□ 0.97
SNX4O95219 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.08■□□□□ 0.97
SNX4O95219 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SNX4O95219 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.08■□□□□ 0.96
SNX4O95219 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
SNX4O95219 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SNX4O95219 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.07■□□□□ 0.96
SNX4O95219 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.07■□□□□ 0.96
SNX4O95219 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNX4O95219 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.07■□□□□ 0.96
SNX4O95219 AC131212.1-201ENST00000613771 668 ntBASIC21.07■□□□□ 0.96
SNX4O95219 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SNX4O95219 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SNX4O95219 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SNX4O95219 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNX4O95219 AL022069.1-201ENST00000568025 1636 ntBASIC21.07■□□□□ 0.96
SNX4O95219 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SNX4O95219 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.06■□□□□ 0.96
SNX4O95219 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX4O95219 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.06■□□□□ 0.96
SNX4O95219 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNX4O95219 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX4O95219 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.06■□□□□ 0.96
SNX4O95219 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX4O95219 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SNX4O95219 MIR6724-1-201ENST00000616420 92 ntBASIC21.06■□□□□ 0.96
SNX4O95219 MIR6724-2-201ENST00000616483 92 ntBASIC21.06■□□□□ 0.96
SNX4O95219 MIR6724-4-201ENST00000617390 92 ntBASIC21.06■□□□□ 0.96
SNX4O95219 MIR6724-3-201ENST00000622482 92 ntBASIC21.06■□□□□ 0.96
SNX4O95219 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms