Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 ALDH1A3-203ENST00000557963 1670 ntBASIC21.84■■□□□ 1.09
SNRNP200O75643 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.84■■□□□ 1.09
SNRNP200O75643 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SNRNP200O75643 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SNRNP200O75643 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.84■■□□□ 1.09
SNRNP200O75643 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.84■■□□□ 1.09
SNRNP200O75643 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SNRNP200O75643 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNRNP200O75643 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.83■■□□□ 1.09
SNRNP200O75643 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SNRNP200O75643 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.83■■□□□ 1.09
SNRNP200O75643 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNRNP200O75643 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SNRNP200O75643 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SNRNP200O75643 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SNRNP200O75643 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SNRNP200O75643 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SNRNP200O75643 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SNRNP200O75643 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNRNP200O75643 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNRNP200O75643 AL161729.1-201ENST00000604104 1402 ntBASIC21.82■■□□□ 1.08
SNRNP200O75643 AL136116.3-201ENST00000402907 1138 ntBASIC21.82■■□□□ 1.08
SNRNP200O75643 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNRNP200O75643 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNRNP200O75643 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.82■■□□□ 1.08
SNRNP200O75643 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.82■■□□□ 1.08
SNRNP200O75643 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNRNP200O75643 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNRNP200O75643 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNRNP200O75643 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNRNP200O75643 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNRNP200O75643 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.82■■□□□ 1.08
SNRNP200O75643 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNRNP200O75643 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNRNP200O75643 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNRNP200O75643 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNRNP200O75643 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNRNP200O75643 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.81■■□□□ 1.08
SNRNP200O75643 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SNRNP200O75643 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNRNP200O75643 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SNRNP200O75643 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.8■■□□□ 1.08
SNRNP200O75643 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.8■■□□□ 1.08
SNRNP200O75643 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRNP200O75643 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRNP200O75643 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SNRNP200O75643 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRNP200O75643 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRNP200O75643 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRNP200O75643 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNRNP200O75643 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRNP200O75643 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRNP200O75643 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRNP200O75643 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRNP200O75643 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SNRNP200O75643 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRNP200O75643 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNRNP200O75643 AC008406.3-201ENST00000620001 1374 ntBASIC21.79■■□□□ 1.08
SNRNP200O75643 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.79■■□□□ 1.08
SNRNP200O75643 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNRNP200O75643 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.79■■□□□ 1.08
SNRNP200O75643 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SNRNP200O75643 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.79■■□□□ 1.08
SNRNP200O75643 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNRNP200O75643 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNRNP200O75643 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNRNP200O75643 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNRNP200O75643 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNRNP200O75643 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNRNP200O75643 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNRNP200O75643 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNRNP200O75643 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.78■■□□□ 1.08
SNRNP200O75643 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNRNP200O75643 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SNRNP200O75643 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNRNP200O75643 AC009102.2-201ENST00000606772 1639 ntBASIC21.78■■□□□ 1.08
SNRNP200O75643 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
SNRNP200O75643 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.77■■□□□ 1.08
SNRNP200O75643 AC079630.1-202ENST00000618127 1840 ntBASIC21.77■■□□□ 1.08
SNRNP200O75643 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.77■■□□□ 1.08
SNRNP200O75643 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SNRNP200O75643 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.76■■□□□ 1.07
SNRNP200O75643 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
SNRNP200O75643 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SNRNP200O75643 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.76■■□□□ 1.07
SNRNP200O75643 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.76■■□□□ 1.07
SNRNP200O75643 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNRNP200O75643 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.76■■□□□ 1.07
SNRNP200O75643 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.76■■□□□ 1.07
SNRNP200O75643 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNRNP200O75643 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNRNP200O75643 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SNRNP200O75643 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SNRNP200O75643 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNRNP200O75643 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNRNP200O75643 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNRNP200O75643 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNRNP200O75643 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.74■■□□□ 1.07
SNRNP200O75643 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SNRNP200O75643 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms