Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDE6DO43924 DUX4L29-201ENST00000425409 679 ntBASIC17.58■□□□□ 0.4
PDE6DO43924 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
PDE6DO43924 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6DO43924 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6DO43924 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PDE6DO43924 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6DO43924 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PDE6DO43924 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PDE6DO43924 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6DO43924 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6DO43924 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.57■□□□□ 0.4
PDE6DO43924 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6DO43924 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PDE6DO43924 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
PDE6DO43924 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.56■□□□□ 0.4
PDE6DO43924 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6DO43924 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
PDE6DO43924 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6DO43924 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6DO43924 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6DO43924 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.56■□□□□ 0.4
PDE6DO43924 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.56■□□□□ 0.4
PDE6DO43924 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6DO43924 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.56■□□□□ 0.4
PDE6DO43924 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6DO43924 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6DO43924 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDE6DO43924 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PDE6DO43924 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PDE6DO43924 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6DO43924 SLC25A24-204ENST00000569674 2357 ntBASIC17.55■□□□□ 0.4
PDE6DO43924 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6DO43924 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.55■□□□□ 0.4
PDE6DO43924 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.55■□□□□ 0.4
PDE6DO43924 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
PDE6DO43924 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6DO43924 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6DO43924 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PDE6DO43924 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.55■□□□□ 0.4
PDE6DO43924 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6DO43924 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6DO43924 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6DO43924 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6DO43924 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6DO43924 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6DO43924 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.55■□□□□ 0.4
PDE6DO43924 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6DO43924 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.55■□□□□ 0.4
PDE6DO43924 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.55■□□□□ 0.4
PDE6DO43924 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDE6DO43924 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6DO43924 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
PDE6DO43924 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6DO43924 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.54■□□□□ 0.4
PDE6DO43924 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6DO43924 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.54■□□□□ 0.4
PDE6DO43924 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6DO43924 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6DO43924 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.54■□□□□ 0.4
PDE6DO43924 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6DO43924 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDE6DO43924 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.54■□□□□ 0.4
PDE6DO43924 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.54■□□□□ 0.4
PDE6DO43924 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6DO43924 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6DO43924 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.53■□□□□ 0.4
PDE6DO43924 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.53■□□□□ 0.4
PDE6DO43924 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6DO43924 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6DO43924 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6DO43924 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PDE6DO43924 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6DO43924 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.53■□□□□ 0.4
PDE6DO43924 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.53■□□□□ 0.4
PDE6DO43924 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PDE6DO43924 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6DO43924 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.52■□□□□ 0.4
PDE6DO43924 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.52■□□□□ 0.4
PDE6DO43924 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6DO43924 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.52■□□□□ 0.4
PDE6DO43924 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6DO43924 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6DO43924 DUX4L13-201ENST00000554103 1267 ntBASIC17.52■□□□□ 0.4
PDE6DO43924 DUX4L15-201ENST00000611059 1267 ntBASIC17.52■□□□□ 0.4
PDE6DO43924 DUX4L23-201ENST00000615195 1269 ntBASIC17.52■□□□□ 0.4
PDE6DO43924 DUX4L24-201ENST00000617576 1269 ntBASIC17.52■□□□□ 0.4
PDE6DO43924 DUX4L22-201ENST00000618238 1269 ntBASIC17.52■□□□□ 0.4
PDE6DO43924 DUX4L20-201ENST00000619712 1269 ntBASIC17.52■□□□□ 0.4
PDE6DO43924 DUX4L21-201ENST00000622058 1269 ntBASIC17.52■□□□□ 0.4
PDE6DO43924 DUX4L10-201ENST00000622460 1267 ntBASIC17.52■□□□□ 0.4
PDE6DO43924 DUX4L25-201ENST00000624915 1269 ntBASIC17.52■□□□□ 0.4
PDE6DO43924 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDE6DO43924 AL161729.1-201ENST00000604104 1402 ntBASIC17.52■□□□□ 0.4
PDE6DO43924 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDE6DO43924 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PDE6DO43924 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6DO43924 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.51■□□□□ 0.39
PDE6DO43924 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6DO43924 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms