Protein–RNA interactions for Protein: O43508

TNFSF12, Tumor necrosis factor ligand superfamily member 12, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12O43508 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TNFSF12O43508 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF12O43508 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF12O43508 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TNFSF12O43508 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TNFSF12O43508 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF12O43508 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF12O43508 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF12O43508 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TNFSF12O43508 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.82■□□□□ 0.6
TNFSF12O43508 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF12O43508 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF12O43508 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TNFSF12O43508 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF12O43508 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.81■□□□□ 0.6
TNFSF12O43508 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF12O43508 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF12O43508 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.81■□□□□ 0.6
TNFSF12O43508 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TNFSF12O43508 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.81■□□□□ 0.6
TNFSF12O43508 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.81■□□□□ 0.6
TNFSF12O43508 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF12O43508 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.81■□□□□ 0.6
TNFSF12O43508 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF12O43508 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.81■□□□□ 0.6
TNFSF12O43508 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12O43508 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12O43508 RNF126P1-201ENST00000567452 1320 ntBASIC18.8■□□□□ 0.6
TNFSF12O43508 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12O43508 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFSF12O43508 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TNFSF12O43508 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.8■□□□□ 0.6
TNFSF12O43508 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.8■□□□□ 0.6
TNFSF12O43508 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFSF12O43508 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TNFSF12O43508 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12O43508 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12O43508 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
TNFSF12O43508 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFSF12O43508 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TNFSF12O43508 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF12O43508 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFSF12O43508 AL592295.1-201ENST00000400984 884 ntBASIC18.79■□□□□ 0.6
TNFSF12O43508 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF12O43508 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFSF12O43508 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF12O43508 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TNFSF12O43508 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.79■□□□□ 0.6
TNFSF12O43508 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TNFSF12O43508 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFSF12O43508 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TNFSF12O43508 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF12O43508 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.79■□□□□ 0.6
TNFSF12O43508 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF12O43508 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF12O43508 AC233723.2-201ENST00000623798 2106 ntBASIC18.79■□□□□ 0.6
TNFSF12O43508 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFSF12O43508 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TNFSF12O43508 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF12O43508 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF12O43508 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF12O43508 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF12O43508 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TNFSF12O43508 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF12O43508 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF12O43508 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.78■□□□□ 0.6
TNFSF12O43508 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF12O43508 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF12O43508 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF12O43508 AL117328.2-201ENST00000624617 1940 ntBASIC18.78■□□□□ 0.6
TNFSF12O43508 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF12O43508 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
TNFSF12O43508 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFSF12O43508 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.77■□□□□ 0.6
TNFSF12O43508 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF12O43508 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
TNFSF12O43508 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF12O43508 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFSF12O43508 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.77■□□□□ 0.6
TNFSF12O43508 AC087393.1-201ENST00000582896 145 ntBASIC18.77■□□□□ 0.6
TNFSF12O43508 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.77■□□□□ 0.6
TNFSF12O43508 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
TNFSF12O43508 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.77■□□□□ 0.6
TNFSF12O43508 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.77■□□□□ 0.6
TNFSF12O43508 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TNFSF12O43508 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF12O43508 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF12O43508 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF12O43508 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TNFSF12O43508 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.76■□□□□ 0.59
TNFSF12O43508 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
TNFSF12O43508 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.76■□□□□ 0.59
TNFSF12O43508 MIR6765-201ENST00000614092 87 ntBASIC18.76■□□□□ 0.59
TNFSF12O43508 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF12O43508 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF12O43508 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF12O43508 C1orf229-201ENST00000623686 2258 ntBASIC18.76■□□□□ 0.59
TNFSF12O43508 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF12O43508 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFSF12O43508 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms