Protein–RNA interactions for Protein: O15027

SEC16A, Protein transport protein Sec16A, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16AO15027 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.49■■□□□ 1.03
SEC16AO15027 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SEC16AO15027 PBX2P1-201ENST00000493219 1291 ntBASIC21.49■■□□□ 1.03
SEC16AO15027 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.49■■□□□ 1.03
SEC16AO15027 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SEC16AO15027 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SEC16AO15027 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SEC16AO15027 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SEC16AO15027 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.48■■□□□ 1.03
SEC16AO15027 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SEC16AO15027 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.48■■□□□ 1.03
SEC16AO15027 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.48■■□□□ 1.03
SEC16AO15027 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.48■■□□□ 1.03
SEC16AO15027 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SEC16AO15027 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SEC16AO15027 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SEC16AO15027 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SEC16AO15027 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SEC16AO15027 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.47■■□□□ 1.03
SEC16AO15027 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SEC16AO15027 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.47■■□□□ 1.03
SEC16AO15027 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SEC16AO15027 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.47■■□□□ 1.03
SEC16AO15027 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SEC16AO15027 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.46■■□□□ 1.03
SEC16AO15027 LINC00543-201ENST00000567234 1845 ntBASIC21.46■■□□□ 1.03
SEC16AO15027 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SEC16AO15027 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.46■■□□□ 1.03
SEC16AO15027 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SEC16AO15027 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SEC16AO15027 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SEC16AO15027 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SEC16AO15027 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SEC16AO15027 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SEC16AO15027 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SEC16AO15027 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SEC16AO15027 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SEC16AO15027 AC142381.2-201ENST00000566120 298 ntBASIC21.46■■□□□ 1.03
SEC16AO15027 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SEC16AO15027 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SEC16AO15027 AL161729.1-201ENST00000604104 1402 ntBASIC21.45■■□□□ 1.02
SEC16AO15027 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SEC16AO15027 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
SEC16AO15027 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.45■■□□□ 1.02
SEC16AO15027 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SEC16AO15027 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SEC16AO15027 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
SEC16AO15027 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SEC16AO15027 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SEC16AO15027 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SEC16AO15027 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SEC16AO15027 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SEC16AO15027 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SEC16AO15027 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SEC16AO15027 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SEC16AO15027 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SEC16AO15027 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SEC16AO15027 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SEC16AO15027 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SEC16AO15027 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.44■■□□□ 1.02
SEC16AO15027 AC026271.2-201ENST00000428091 497 ntBASIC21.44■■□□□ 1.02
SEC16AO15027 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.44■■□□□ 1.02
SEC16AO15027 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEC16AO15027 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEC16AO15027 AL138724.1-201ENST00000606771 1088 ntBASIC21.43■■□□□ 1.02
SEC16AO15027 AL355001.2-201ENST00000620617 1191 ntBASIC21.43■■□□□ 1.02
SEC16AO15027 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEC16AO15027 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.43■■□□□ 1.02
SEC16AO15027 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEC16AO15027 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEC16AO15027 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SEC16AO15027 AP001330.3-201ENST00000520123 633 ntBASIC21.43■■□□□ 1.02
SEC16AO15027 AC099791.2-201ENST00000605725 427 ntBASIC21.43■■□□□ 1.02
SEC16AO15027 AC011298.3-201ENST00000615796 283 ntBASIC21.43■■□□□ 1.02
SEC16AO15027 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.42■■□□□ 1.02
SEC16AO15027 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SEC16AO15027 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.42■■□□□ 1.02
SEC16AO15027 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.42■■□□□ 1.02
SEC16AO15027 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.41■■□□□ 1.02
SEC16AO15027 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SEC16AO15027 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SEC16AO15027 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SEC16AO15027 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SEC16AO15027 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SEC16AO15027 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SEC16AO15027 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SEC16AO15027 AC006455.2-201ENST00000429931 906 ntBASIC21.41■■□□□ 1.02
SEC16AO15027 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SEC16AO15027 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SEC16AO15027 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.4■■□□□ 1.02
SEC16AO15027 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SEC16AO15027 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SEC16AO15027 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SEC16AO15027 SRD5A1P1-201ENST00000442297 786 ntBASIC21.4■■□□□ 1.02
SEC16AO15027 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.4■■□□□ 1.02
SEC16AO15027 AC241377.3-202ENST00000626088 1088 ntBASIC21.4■■□□□ 1.02
SEC16AO15027 AC241585.3-202ENST00000628937 1088 ntBASIC21.4■■□□□ 1.02
SEC16AO15027 AC245100.8-202ENST00000629247 1058 ntBASIC21.4■■□□□ 1.02
SEC16AO15027 ALDH1A3-203ENST00000557963 1670 ntBASIC21.4■■□□□ 1.02
SEC16AO15027 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms