Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.13■■□□□ 1.77
ATP2A1O14983 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ATP2A1O14983 AC022211.4-201ENST00000625094 2161 ntBASIC26.13■■□□□ 1.77
ATP2A1O14983 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
ATP2A1O14983 AP003733.4-201ENST00000623785 1697 ntBASIC26.12■■□□□ 1.77
ATP2A1O14983 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.12■■□□□ 1.77
ATP2A1O14983 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.12■■□□□ 1.77
ATP2A1O14983 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.12■■□□□ 1.77
ATP2A1O14983 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.12■■□□□ 1.77
ATP2A1O14983 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATP2A1O14983 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.12■■□□□ 1.77
ATP2A1O14983 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATP2A1O14983 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ATP2A1O14983 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ATP2A1O14983 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.11■■□□□ 1.77
ATP2A1O14983 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
ATP2A1O14983 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ATP2A1O14983 AC006455.2-201ENST00000429931 906 ntBASIC26.11■■□□□ 1.77
ATP2A1O14983 AC027682.1-201ENST00000562846 899 ntBASIC26.11■■□□□ 1.77
ATP2A1O14983 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.11■■□□□ 1.77
ATP2A1O14983 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ATP2A1O14983 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ATP2A1O14983 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.1■■□□□ 1.77
ATP2A1O14983 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ATP2A1O14983 CA15P2-201ENST00000611168 834 ntBASIC26.1■■□□□ 1.77
ATP2A1O14983 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.1■■□□□ 1.77
ATP2A1O14983 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.1■■□□□ 1.77
ATP2A1O14983 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
ATP2A1O14983 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ATP2A1O14983 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ATP2A1O14983 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.09■■□□□ 1.77
ATP2A1O14983 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ATP2A1O14983 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.09■■□□□ 1.77
ATP2A1O14983 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
ATP2A1O14983 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.09■■□□□ 1.77
ATP2A1O14983 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.09■■□□□ 1.77
ATP2A1O14983 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ATP2A1O14983 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.09■■□□□ 1.77
ATP2A1O14983 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
ATP2A1O14983 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ATP2A1O14983 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
ATP2A1O14983 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
ATP2A1O14983 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ATP2A1O14983 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ATP2A1O14983 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.08■■□□□ 1.77
ATP2A1O14983 MIR3181-201ENST00000578512 73 ntBASIC26.08■■□□□ 1.77
ATP2A1O14983 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
ATP2A1O14983 AC009086.3-201ENST00000623486 1008 ntBASIC26.08■■□□□ 1.77
ATP2A1O14983 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ATP2A1O14983 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
ATP2A1O14983 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
ATP2A1O14983 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ATP2A1O14983 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ATP2A1O14983 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ATP2A1O14983 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.06■■□□□ 1.76
ATP2A1O14983 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ATP2A1O14983 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.06■■□□□ 1.76
ATP2A1O14983 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ATP2A1O14983 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ATP2A1O14983 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
ATP2A1O14983 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ATP2A1O14983 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ATP2A1O14983 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ATP2A1O14983 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.05■■□□□ 1.76
ATP2A1O14983 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.05■■□□□ 1.76
ATP2A1O14983 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.05■■□□□ 1.76
ATP2A1O14983 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.05■■□□□ 1.76
ATP2A1O14983 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.05■■□□□ 1.76
ATP2A1O14983 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
ATP2A1O14983 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ATP2A1O14983 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
ATP2A1O14983 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
ATP2A1O14983 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.04■■□□□ 1.76
ATP2A1O14983 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ATP2A1O14983 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
ATP2A1O14983 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ATP2A1O14983 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.04■■□□□ 1.76
ATP2A1O14983 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.03■■□□□ 1.76
ATP2A1O14983 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ATP2A1O14983 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.03■■□□□ 1.76
ATP2A1O14983 AC008764.7-201ENST00000593779 1081 ntBASIC26.03■■□□□ 1.76
ATP2A1O14983 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.03■■□□□ 1.76
ATP2A1O14983 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.03■■□□□ 1.76
ATP2A1O14983 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
ATP2A1O14983 AC099791.1-201ENST00000416440 715 ntBASIC26.02■■□□□ 1.76
ATP2A1O14983 BX842568.3-201ENST00000418104 571 ntBASIC26.02■■□□□ 1.76
ATP2A1O14983 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ATP2A1O14983 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
ATP2A1O14983 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ATP2A1O14983 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC26.02■■□□□ 1.76
ATP2A1O14983 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ATP2A1O14983 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
ATP2A1O14983 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ATP2A1O14983 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ATP2A1O14983 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
ATP2A1O14983 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
ATP2A1O14983 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC26.01■■□□□ 1.75
ATP2A1O14983 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC26.01■■□□□ 1.75
ATP2A1O14983 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.01■■□□□ 1.75
ATP2A1O14983 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.01■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms