Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CACNB4O00305 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CACNB4O00305 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.44■■□□□ 1.18
CACNB4O00305 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.44■■□□□ 1.18
CACNB4O00305 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CACNB4O00305 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CACNB4O00305 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CACNB4O00305 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.44■■□□□ 1.18
CACNB4O00305 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CACNB4O00305 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CACNB4O00305 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.43■■□□□ 1.18
CACNB4O00305 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CACNB4O00305 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CACNB4O00305 AL136162.1-201ENST00000607711 1078 ntBASIC22.43■■□□□ 1.18
CACNB4O00305 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CACNB4O00305 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
CACNB4O00305 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
CACNB4O00305 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CACNB4O00305 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CACNB4O00305 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CACNB4O00305 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.42■■□□□ 1.18
CACNB4O00305 AC133561.4-201ENST00000566112 224 ntBASIC22.42■■□□□ 1.18
CACNB4O00305 AC106739.1-201ENST00000617035 715 ntBASIC22.42■■□□□ 1.18
CACNB4O00305 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.42■■□□□ 1.18
CACNB4O00305 SYT6-210ENST00000641643 1587 ntBASIC22.42■■□□□ 1.18
CACNB4O00305 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.41■■□□□ 1.18
CACNB4O00305 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CACNB4O00305 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CACNB4O00305 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CACNB4O00305 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.41■■□□□ 1.18
CACNB4O00305 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CACNB4O00305 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CACNB4O00305 C17orf82-201ENST00000623772 1530 ntBASIC22.41■■□□□ 1.18
CACNB4O00305 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CACNB4O00305 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CACNB4O00305 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CACNB4O00305 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.4■■□□□ 1.18
CACNB4O00305 AC135279.3-201ENST00000610945 1311 ntBASIC22.4■■□□□ 1.18
CACNB4O00305 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.4■■□□□ 1.18
CACNB4O00305 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CACNB4O00305 AC005837.3-201ENST00000612163 286 ntBASIC22.4■■□□□ 1.18
CACNB4O00305 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.4■■□□□ 1.18
CACNB4O00305 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CACNB4O00305 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CACNB4O00305 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CACNB4O00305 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CACNB4O00305 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CACNB4O00305 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CACNB4O00305 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
CACNB4O00305 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CACNB4O00305 AC099791.2-201ENST00000605725 427 ntBASIC22.39■■□□□ 1.17
CACNB4O00305 AC241377.3-202ENST00000626088 1088 ntBASIC22.39■■□□□ 1.17
CACNB4O00305 AC241585.3-202ENST00000628937 1088 ntBASIC22.39■■□□□ 1.17
CACNB4O00305 AC245100.8-202ENST00000629247 1058 ntBASIC22.39■■□□□ 1.17
CACNB4O00305 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CACNB4O00305 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
CACNB4O00305 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CACNB4O00305 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CACNB4O00305 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CACNB4O00305 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.39■■□□□ 1.17
CACNB4O00305 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.38■■□□□ 1.17
CACNB4O00305 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CACNB4O00305 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.38■■□□□ 1.17
CACNB4O00305 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CACNB4O00305 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.38■■□□□ 1.17
CACNB4O00305 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.38■■□□□ 1.17
CACNB4O00305 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
CACNB4O00305 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.38■■□□□ 1.17
CACNB4O00305 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CACNB4O00305 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.38■■□□□ 1.17
CACNB4O00305 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.38■■□□□ 1.17
CACNB4O00305 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CACNB4O00305 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.38■■□□□ 1.17
CACNB4O00305 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CACNB4O00305 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.38■■□□□ 1.17
CACNB4O00305 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CACNB4O00305 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CACNB4O00305 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CACNB4O00305 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.38■■□□□ 1.17
CACNB4O00305 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CACNB4O00305 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CACNB4O00305 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.37■■□□□ 1.17
CACNB4O00305 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
CACNB4O00305 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CACNB4O00305 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CACNB4O00305 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CACNB4O00305 AC093323.1-202ENST00000635031 2045 ntBASIC22.37■■□□□ 1.17
CACNB4O00305 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.37■■□□□ 1.17
CACNB4O00305 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.37■■□□□ 1.17
CACNB4O00305 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.37■■□□□ 1.17
CACNB4O00305 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CACNB4O00305 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.36■■□□□ 1.17
CACNB4O00305 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CACNB4O00305 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CACNB4O00305 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CACNB4O00305 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CACNB4O00305 AC024257.2-201ENST00000549699 147 ntBASIC22.36■■□□□ 1.17
CACNB4O00305 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.36■■□□□ 1.17
CACNB4O00305 AC141586.4-201ENST00000624558 1573 ntBASIC22.36■■□□□ 1.17
CACNB4O00305 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms