Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RBFOX3A6NFN3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RBFOX3A6NFN3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RBFOX3A6NFN3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RBFOX3A6NFN3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
RBFOX3A6NFN3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RBFOX3A6NFN3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.9■□□□□ 0.46
RBFOX3A6NFN3 SUZ12P1-203ENST00000578195 985 ntBASIC17.9■□□□□ 0.46
RBFOX3A6NFN3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RBFOX3A6NFN3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RBFOX3A6NFN3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RBFOX3A6NFN3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RBFOX3A6NFN3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RBFOX3A6NFN3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RBFOX3A6NFN3 AC073130.3-201ENST00000624389 2278 ntBASIC17.89■□□□□ 0.46
RBFOX3A6NFN3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
RBFOX3A6NFN3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.89■□□□□ 0.45
RBFOX3A6NFN3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RBFOX3A6NFN3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RBFOX3A6NFN3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RBFOX3A6NFN3 AL359258.2-201ENST00000564063 1566 ntBASIC17.89■□□□□ 0.45
RBFOX3A6NFN3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.88■□□□□ 0.45
RBFOX3A6NFN3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.88■□□□□ 0.45
RBFOX3A6NFN3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.88■□□□□ 0.45
RBFOX3A6NFN3 HNRNPLP2-201ENST00000568980 1570 ntBASIC17.88■□□□□ 0.45
RBFOX3A6NFN3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RBFOX3A6NFN3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RBFOX3A6NFN3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17.88■□□□□ 0.45
RBFOX3A6NFN3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RBFOX3A6NFN3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RBFOX3A6NFN3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RBFOX3A6NFN3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RBFOX3A6NFN3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RBFOX3A6NFN3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RBFOX3A6NFN3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RBFOX3A6NFN3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RBFOX3A6NFN3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RBFOX3A6NFN3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RBFOX3A6NFN3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RBFOX3A6NFN3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RBFOX3A6NFN3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RBFOX3A6NFN3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.86■□□□□ 0.45
RBFOX3A6NFN3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.86■□□□□ 0.45
RBFOX3A6NFN3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.86■□□□□ 0.45
RBFOX3A6NFN3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RBFOX3A6NFN3 C11orf96-202ENST00000528572 1834 ntBASIC17.86■□□□□ 0.45
RBFOX3A6NFN3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RBFOX3A6NFN3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RBFOX3A6NFN3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RBFOX3A6NFN3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RBFOX3A6NFN3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RBFOX3A6NFN3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RBFOX3A6NFN3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RBFOX3A6NFN3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RBFOX3A6NFN3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.85■□□□□ 0.45
RBFOX3A6NFN3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RBFOX3A6NFN3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
RBFOX3A6NFN3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RBFOX3A6NFN3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RBFOX3A6NFN3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.84■□□□□ 0.45
RBFOX3A6NFN3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RBFOX3A6NFN3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.84■□□□□ 0.45
RBFOX3A6NFN3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RBFOX3A6NFN3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RBFOX3A6NFN3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RBFOX3A6NFN3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RBFOX3A6NFN3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RBFOX3A6NFN3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RBFOX3A6NFN3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RBFOX3A6NFN3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RBFOX3A6NFN3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RBFOX3A6NFN3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RBFOX3A6NFN3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.83■□□□□ 0.44
RBFOX3A6NFN3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.83■□□□□ 0.44
RBFOX3A6NFN3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RBFOX3A6NFN3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RBFOX3A6NFN3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.83■□□□□ 0.44
RBFOX3A6NFN3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms