Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MEIS3P1A6NDR6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MEIS3P1A6NDR6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MEIS3P1A6NDR6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MEIS3P1A6NDR6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
MEIS3P1A6NDR6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.39■□□□□ 0.69
MEIS3P1A6NDR6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MEIS3P1A6NDR6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MEIS3P1A6NDR6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MEIS3P1A6NDR6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MEIS3P1A6NDR6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MEIS3P1A6NDR6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.39■□□□□ 0.69
MEIS3P1A6NDR6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MEIS3P1A6NDR6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MEIS3P1A6NDR6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MEIS3P1A6NDR6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
MEIS3P1A6NDR6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MEIS3P1A6NDR6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MEIS3P1A6NDR6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MEIS3P1A6NDR6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MEIS3P1A6NDR6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
MEIS3P1A6NDR6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MEIS3P1A6NDR6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MEIS3P1A6NDR6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MEIS3P1A6NDR6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
MEIS3P1A6NDR6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MEIS3P1A6NDR6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MEIS3P1A6NDR6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.37■□□□□ 0.69
MEIS3P1A6NDR6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MEIS3P1A6NDR6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MEIS3P1A6NDR6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.37■□□□□ 0.69
MEIS3P1A6NDR6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
MEIS3P1A6NDR6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MEIS3P1A6NDR6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.37■□□□□ 0.69
MEIS3P1A6NDR6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MEIS3P1A6NDR6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.37■□□□□ 0.69
MEIS3P1A6NDR6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MEIS3P1A6NDR6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MEIS3P1A6NDR6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.36■□□□□ 0.69
MEIS3P1A6NDR6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
MEIS3P1A6NDR6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MEIS3P1A6NDR6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MEIS3P1A6NDR6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
MEIS3P1A6NDR6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
MEIS3P1A6NDR6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MEIS3P1A6NDR6 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MEIS3P1A6NDR6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MEIS3P1A6NDR6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MEIS3P1A6NDR6 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.35■□□□□ 0.69
MEIS3P1A6NDR6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MEIS3P1A6NDR6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MEIS3P1A6NDR6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.35■□□□□ 0.69
MEIS3P1A6NDR6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
MEIS3P1A6NDR6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MEIS3P1A6NDR6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
MEIS3P1A6NDR6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MEIS3P1A6NDR6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MEIS3P1A6NDR6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
MEIS3P1A6NDR6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MEIS3P1A6NDR6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
MEIS3P1A6NDR6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MEIS3P1A6NDR6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
MEIS3P1A6NDR6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
MEIS3P1A6NDR6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
MEIS3P1A6NDR6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
MEIS3P1A6NDR6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.34■□□□□ 0.69
MEIS3P1A6NDR6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
MEIS3P1A6NDR6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MEIS3P1A6NDR6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
MEIS3P1A6NDR6 ECEL1P1-201ENST00000373592 1742 ntBASIC19.34■□□□□ 0.69
MEIS3P1A6NDR6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
MEIS3P1A6NDR6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.33■□□□□ 0.69
MEIS3P1A6NDR6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.33■□□□□ 0.69
MEIS3P1A6NDR6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.33■□□□□ 0.69
MEIS3P1A6NDR6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MEIS3P1A6NDR6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MEIS3P1A6NDR6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
MEIS3P1A6NDR6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.33■□□□□ 0.68
MEIS3P1A6NDR6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
MEIS3P1A6NDR6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MEIS3P1A6NDR6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MEIS3P1A6NDR6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MEIS3P1A6NDR6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MEIS3P1A6NDR6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MEIS3P1A6NDR6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 ECEL1P2-201ENST00000461596 1295 ntBASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MEIS3P1A6NDR6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms