Protein–RNA interactions for Protein: A0A1W2PPD8

KDM4F, Lysine demethylase 4F, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4FA0A1W2PPD8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
KDM4FA0A1W2PPD8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
KDM4FA0A1W2PPD8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
KDM4FA0A1W2PPD8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
KDM4FA0A1W2PPD8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC34.26■■■■□ 3.08
KDM4FA0A1W2PPD8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
KDM4FA0A1W2PPD8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC34.26■■■■□ 3.08
KDM4FA0A1W2PPD8 AC010331.1-201ENST00000611423 582 ntBASIC34.26■■■■□ 3.08
KDM4FA0A1W2PPD8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC34.26■■■■□ 3.07
KDM4FA0A1W2PPD8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
KDM4FA0A1W2PPD8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC34.25■■■■□ 3.07
KDM4FA0A1W2PPD8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC34.25■■■■□ 3.07
KDM4FA0A1W2PPD8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
KDM4FA0A1W2PPD8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC34.24■■■■□ 3.07
KDM4FA0A1W2PPD8 AP006294.2-201ENST00000641667 209 ntBASIC34.24■■■■□ 3.07
KDM4FA0A1W2PPD8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
KDM4FA0A1W2PPD8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC34.23■■■■□ 3.07
KDM4FA0A1W2PPD8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC34.22■■■■□ 3.07
KDM4FA0A1W2PPD8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC34.22■■■■□ 3.07
KDM4FA0A1W2PPD8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
KDM4FA0A1W2PPD8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
KDM4FA0A1W2PPD8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
KDM4FA0A1W2PPD8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
KDM4FA0A1W2PPD8 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
KDM4FA0A1W2PPD8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
KDM4FA0A1W2PPD8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC34.21■■■■□ 3.07
KDM4FA0A1W2PPD8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
KDM4FA0A1W2PPD8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC34.2■■■■□ 3.07
KDM4FA0A1W2PPD8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC34.2■■■■□ 3.07
KDM4FA0A1W2PPD8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
KDM4FA0A1W2PPD8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC34.19■■■■□ 3.06
KDM4FA0A1W2PPD8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC34.19■■■■□ 3.06
KDM4FA0A1W2PPD8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC34.19■■■■□ 3.06
KDM4FA0A1W2PPD8 AC004854.2-201ENST00000608450 1441 ntBASIC34.19■■■■□ 3.06
KDM4FA0A1W2PPD8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC34.19■■■■□ 3.06
KDM4FA0A1W2PPD8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
KDM4FA0A1W2PPD8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC34.18■■■■□ 3.06
KDM4FA0A1W2PPD8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
KDM4FA0A1W2PPD8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC34.18■■■■□ 3.06
KDM4FA0A1W2PPD8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
KDM4FA0A1W2PPD8 MDK-213ENST00000617138 635 ntTSL 2 BASIC34.18■■■■□ 3.06
KDM4FA0A1W2PPD8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC34.17■■■■□ 3.06
KDM4FA0A1W2PPD8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC34.17■■■■□ 3.06
KDM4FA0A1W2PPD8 FAM210CP-201ENST00000445714 574 ntBASIC34.17■■■■□ 3.06
KDM4FA0A1W2PPD8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
KDM4FA0A1W2PPD8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC34.16■■■■□ 3.06
KDM4FA0A1W2PPD8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
KDM4FA0A1W2PPD8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC34.16■■■■□ 3.06
KDM4FA0A1W2PPD8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC34.16■■■■□ 3.06
KDM4FA0A1W2PPD8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC34.16■■■■□ 3.06
KDM4FA0A1W2PPD8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC34.16■■■■□ 3.06
KDM4FA0A1W2PPD8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC34.16■■■■□ 3.06
KDM4FA0A1W2PPD8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
KDM4FA0A1W2PPD8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC34.15■■■■□ 3.06
KDM4FA0A1W2PPD8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC34.15■■■■□ 3.06
KDM4FA0A1W2PPD8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC34.15■■■■□ 3.06
KDM4FA0A1W2PPD8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC34.14■■■■□ 3.06
KDM4FA0A1W2PPD8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
KDM4FA0A1W2PPD8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC34.14■■■■□ 3.06
KDM4FA0A1W2PPD8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC34.14■■■■□ 3.06
KDM4FA0A1W2PPD8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC34.14■■■■□ 3.06
KDM4FA0A1W2PPD8 pRNA.6-201ENST00000610482 90 ntBASIC34.14■■■■□ 3.06
KDM4FA0A1W2PPD8 pRNA.5-201ENST00000612139 90 ntBASIC34.14■■■■□ 3.06
KDM4FA0A1W2PPD8 pRNA.11-201ENST00000618423 90 ntBASIC34.14■■■■□ 3.06
KDM4FA0A1W2PPD8 pRNA.13-201ENST00000619112 90 ntBASIC34.14■■■■□ 3.06
KDM4FA0A1W2PPD8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
KDM4FA0A1W2PPD8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC34.13■■■■□ 3.05
KDM4FA0A1W2PPD8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC34.12■■■■□ 3.05
KDM4FA0A1W2PPD8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC34.12■■■■□ 3.05
KDM4FA0A1W2PPD8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC34.12■■■■□ 3.05
KDM4FA0A1W2PPD8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
KDM4FA0A1W2PPD8 COX20-201ENST00000366528 568 ntTSL 2 BASIC34.12■■■■□ 3.05
KDM4FA0A1W2PPD8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC34.12■■■■□ 3.05
KDM4FA0A1W2PPD8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
KDM4FA0A1W2PPD8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC34.11■■■■□ 3.05
KDM4FA0A1W2PPD8 DUSP5P2-201ENST00000426873 1033 ntBASIC34.11■■■■□ 3.05
KDM4FA0A1W2PPD8 GCSHP5-201ENST00000443090 522 ntBASIC34.11■■■■□ 3.05
KDM4FA0A1W2PPD8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC34.11■■■■□ 3.05
KDM4FA0A1W2PPD8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC34.11■■■■□ 3.05
KDM4FA0A1W2PPD8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC34.1■■■■□ 3.05
KDM4FA0A1W2PPD8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC34.1■■■■□ 3.05
KDM4FA0A1W2PPD8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC34.1■■■■□ 3.05
KDM4FA0A1W2PPD8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC34.1■■■■□ 3.05
KDM4FA0A1W2PPD8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC34.1■■■■□ 3.05
KDM4FA0A1W2PPD8 RPS2P4-201ENST00000476944 856 ntBASIC34.1■■■■□ 3.05
KDM4FA0A1W2PPD8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC34.1■■■■□ 3.05
KDM4FA0A1W2PPD8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC34.1■■■■□ 3.05
KDM4FA0A1W2PPD8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
KDM4FA0A1W2PPD8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC34.1■■■■□ 3.05
KDM4FA0A1W2PPD8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC34.1■■■■□ 3.05
KDM4FA0A1W2PPD8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC34.09■■■■□ 3.05
KDM4FA0A1W2PPD8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC34.09■■■■□ 3.05
KDM4FA0A1W2PPD8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC34.09■■■■□ 3.05
KDM4FA0A1W2PPD8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC34.09■■■■□ 3.05
KDM4FA0A1W2PPD8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC34.09■■■■□ 3.05
KDM4FA0A1W2PPD8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC34.09■■■■□ 3.05
KDM4FA0A1W2PPD8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
KDM4FA0A1W2PPD8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC34.08■■■■□ 3.05
KDM4FA0A1W2PPD8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC34.08■■■■□ 3.05
KDM4FA0A1W2PPD8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC34.08■■■■□ 3.05
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms