Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16■□□□□ 0.15
TRAV10A0A0B4J240 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV10A0A0B4J240 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV10A0A0B4J240 ALDH1A3-203ENST00000557963 1670 ntBASIC15.99■□□□□ 0.15
TRAV10A0A0B4J240 AC022211.4-201ENST00000625094 2161 ntBASIC15.99■□□□□ 0.15
TRAV10A0A0B4J240 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV10A0A0B4J240 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV10A0A0B4J240 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV10A0A0B4J240 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV10A0A0B4J240 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.99■□□□□ 0.15
TRAV10A0A0B4J240 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.99■□□□□ 0.15
TRAV10A0A0B4J240 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.99■□□□□ 0.15
TRAV10A0A0B4J240 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV10A0A0B4J240 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV10A0A0B4J240 C17orf82-201ENST00000623772 1530 ntBASIC15.99■□□□□ 0.15
TRAV10A0A0B4J240 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV10A0A0B4J240 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV10A0A0B4J240 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV10A0A0B4J240 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV10A0A0B4J240 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV10A0A0B4J240 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV10A0A0B4J240 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV10A0A0B4J240 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV10A0A0B4J240 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
TRAV10A0A0B4J240 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV10A0A0B4J240 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV10A0A0B4J240 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV10A0A0B4J240 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV10A0A0B4J240 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV10A0A0B4J240 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRAV10A0A0B4J240 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV10A0A0B4J240 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV10A0A0B4J240 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAV10A0A0B4J240 SERBP1P1-201ENST00000396021 1160 ntBASIC15.97■□□□□ 0.15
TRAV10A0A0B4J240 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV10A0A0B4J240 SUDS3P1-201ENST00000505831 966 ntBASIC15.97■□□□□ 0.15
TRAV10A0A0B4J240 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV10A0A0B4J240 AC011298.3-201ENST00000615796 283 ntBASIC15.97■□□□□ 0.15
TRAV10A0A0B4J240 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV10A0A0B4J240 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV10A0A0B4J240 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV10A0A0B4J240 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV10A0A0B4J240 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV10A0A0B4J240 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV10A0A0B4J240 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TRAV10A0A0B4J240 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV10A0A0B4J240 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV10A0A0B4J240 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAV10A0A0B4J240 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV10A0A0B4J240 AL031432.3-201ENST00000607698 485 ntBASIC15.96■□□□□ 0.15
TRAV10A0A0B4J240 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV10A0A0B4J240 AC009086.3-201ENST00000623486 1008 ntBASIC15.96■□□□□ 0.15
TRAV10A0A0B4J240 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.96■□□□□ 0.15
TRAV10A0A0B4J240 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV10A0A0B4J240 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRAV10A0A0B4J240 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV10A0A0B4J240 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC15.96■□□□□ 0.14
TRAV10A0A0B4J240 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
TRAV10A0A0B4J240 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRAV10A0A0B4J240 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV10A0A0B4J240 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV10A0A0B4J240 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV10A0A0B4J240 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
TRAV10A0A0B4J240 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV10A0A0B4J240 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV10A0A0B4J240 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV10A0A0B4J240 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV10A0A0B4J240 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV10A0A0B4J240 AF213884.3-201ENST00000563833 479 ntBASIC15.95■□□□□ 0.14
TRAV10A0A0B4J240 MIR4767-201ENST00000582827 78 ntBASIC15.95■□□□□ 0.14
TRAV10A0A0B4J240 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV10A0A0B4J240 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV10A0A0B4J240 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TRAV10A0A0B4J240 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV10A0A0B4J240 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRAV10A0A0B4J240 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV10A0A0B4J240 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRAV10A0A0B4J240 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV10A0A0B4J240 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV10A0A0B4J240 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV10A0A0B4J240 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV10A0A0B4J240 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV10A0A0B4J240 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV10A0A0B4J240 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV10A0A0B4J240 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV10A0A0B4J240 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV10A0A0B4J240 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV10A0A0B4J240 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV10A0A0B4J240 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV10A0A0B4J240 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV10A0A0B4J240 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV10A0A0B4J240 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV10A0A0B4J240 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV10A0A0B4J240 AC142381.3-201ENST00000568208 1670 ntBASIC15.93■□□□□ 0.14
TRAV10A0A0B4J240 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV10A0A0B4J240 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV10A0A0B4J240 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV10A0A0B4J240 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV10A0A0B4J240 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
TRAV10A0A0B4J240 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms