Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV7-1A0A0A6YYK4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV7-1A0A0A6YYK4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV7-1A0A0A6YYK4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV7-1A0A0A6YYK4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.6■□□□□ 0.41
TRBV7-1A0A0A6YYK4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TRBV7-1A0A0A6YYK4 AC005703.6-201ENST00000623265 1329 ntBASIC17.6■□□□□ 0.41
TRBV7-1A0A0A6YYK4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV7-1A0A0A6YYK4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV7-1A0A0A6YYK4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV7-1A0A0A6YYK4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV7-1A0A0A6YYK4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV7-1A0A0A6YYK4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV7-1A0A0A6YYK4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV7-1A0A0A6YYK4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV7-1A0A0A6YYK4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRBV7-1A0A0A6YYK4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRBV7-1A0A0A6YYK4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV7-1A0A0A6YYK4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRBV7-1A0A0A6YYK4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV7-1A0A0A6YYK4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV7-1A0A0A6YYK4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV7-1A0A0A6YYK4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV7-1A0A0A6YYK4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV7-1A0A0A6YYK4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
TRBV7-1A0A0A6YYK4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.59■□□□□ 0.41
TRBV7-1A0A0A6YYK4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV7-1A0A0A6YYK4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV7-1A0A0A6YYK4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV7-1A0A0A6YYK4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV7-1A0A0A6YYK4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV7-1A0A0A6YYK4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRBV7-1A0A0A6YYK4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.58■□□□□ 0.41
TRBV7-1A0A0A6YYK4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.58■□□□□ 0.41
TRBV7-1A0A0A6YYK4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV7-1A0A0A6YYK4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRBV7-1A0A0A6YYK4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.58■□□□□ 0.4
TRBV7-1A0A0A6YYK4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV7-1A0A0A6YYK4 MTDHP2-201ENST00000601468 714 ntBASIC17.58■□□□□ 0.4
TRBV7-1A0A0A6YYK4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV7-1A0A0A6YYK4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV7-1A0A0A6YYK4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV7-1A0A0A6YYK4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV7-1A0A0A6YYK4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV7-1A0A0A6YYK4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV7-1A0A0A6YYK4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV7-1A0A0A6YYK4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
TRBV7-1A0A0A6YYK4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV7-1A0A0A6YYK4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV7-1A0A0A6YYK4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV7-1A0A0A6YYK4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.57■□□□□ 0.4
TRBV7-1A0A0A6YYK4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV7-1A0A0A6YYK4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRBV7-1A0A0A6YYK4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRBV7-1A0A0A6YYK4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV7-1A0A0A6YYK4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV7-1A0A0A6YYK4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV7-1A0A0A6YYK4 DUSP8P5-201ENST00000422884 1815 ntBASIC17.56■□□□□ 0.4
TRBV7-1A0A0A6YYK4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRBV7-1A0A0A6YYK4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.56■□□□□ 0.4
TRBV7-1A0A0A6YYK4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV7-1A0A0A6YYK4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV7-1A0A0A6YYK4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRBV7-1A0A0A6YYK4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRBV7-1A0A0A6YYK4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV7-1A0A0A6YYK4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRBV7-1A0A0A6YYK4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV7-1A0A0A6YYK4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV7-1A0A0A6YYK4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV7-1A0A0A6YYK4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV7-1A0A0A6YYK4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV7-1A0A0A6YYK4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV7-1A0A0A6YYK4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV7-1A0A0A6YYK4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV7-1A0A0A6YYK4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBV7-1A0A0A6YYK4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV7-1A0A0A6YYK4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV7-1A0A0A6YYK4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.55■□□□□ 0.4
TRBV7-1A0A0A6YYK4 ANOS2P-203ENST00000472227 1816 ntBASIC17.55■□□□□ 0.4
TRBV7-1A0A0A6YYK4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRBV7-1A0A0A6YYK4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV7-1A0A0A6YYK4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV7-1A0A0A6YYK4 AC092068.2-201ENST00000590491 1708 ntBASIC17.55■□□□□ 0.4
TRBV7-1A0A0A6YYK4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV7-1A0A0A6YYK4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV7-1A0A0A6YYK4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV7-1A0A0A6YYK4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV7-1A0A0A6YYK4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV7-1A0A0A6YYK4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRBV7-1A0A0A6YYK4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.54■□□□□ 0.4
TRBV7-1A0A0A6YYK4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV7-1A0A0A6YYK4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV7-1A0A0A6YYK4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.54■□□□□ 0.4
TRBV7-1A0A0A6YYK4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRBV7-1A0A0A6YYK4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV7-1A0A0A6YYK4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRBV7-1A0A0A6YYK4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV7-1A0A0A6YYK4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.54■□□□□ 0.4
TRBV7-1A0A0A6YYK4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV7-1A0A0A6YYK4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms