Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.66■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.65■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.65■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.65■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.65■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.65■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TNFSF12-TNFSF13A0A0A6YY99 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.64■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.64■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.64■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 AC008406.3-201ENST00000620001 1374 ntBASIC20.63■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.63■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.63■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.63■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 MIR6724-1-201ENST00000616420 92 ntBASIC20.63■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 MIR6724-2-201ENST00000616483 92 ntBASIC20.63■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 MIR6724-4-201ENST00000617390 92 ntBASIC20.63■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 MIR6724-3-201ENST00000622482 92 ntBASIC20.63■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.63■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.62■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.62■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.62■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 AC005703.6-201ENST00000623265 1329 ntBASIC20.61■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.61■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.61■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.6■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 AL117332.1-201ENST00000622628 974 ntBASIC20.6■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.59■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.58■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.58■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 MIR3621-201ENST00000580529 85 ntBASIC20.58■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.58■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.58■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.58■□□□□ 0.89
TNFSF12-TNFSF13A0A0A6YY99 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.57■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.57■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 AC131281.2-201ENST00000520478 145 ntBASIC20.56■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.56■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.56■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TNFSF12-TNFSF13A0A0A6YY99 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms