Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV9-1A0A075B6T8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRAV9-1A0A075B6T8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV9-1A0A075B6T8 AC073130.3-201ENST00000624389 2278 ntBASIC17.08■□□□□ 0.33
TRAV9-1A0A075B6T8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV9-1A0A075B6T8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV9-1A0A075B6T8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV9-1A0A075B6T8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV9-1A0A075B6T8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TRAV9-1A0A075B6T8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV9-1A0A075B6T8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV9-1A0A075B6T8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV9-1A0A075B6T8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV9-1A0A075B6T8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV9-1A0A075B6T8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRAV9-1A0A075B6T8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
TRAV9-1A0A075B6T8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.08■□□□□ 0.32
TRAV9-1A0A075B6T8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV9-1A0A075B6T8 AC092667.1-201ENST00000434301 2586 ntBASIC17.07■□□□□ 0.32
TRAV9-1A0A075B6T8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV9-1A0A075B6T8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV9-1A0A075B6T8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV9-1A0A075B6T8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV9-1A0A075B6T8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV9-1A0A075B6T8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV9-1A0A075B6T8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV9-1A0A075B6T8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 AC005559.1-201ENST00000589661 871 ntBASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 FBXW4P1-201ENST00000426721 2239 ntBASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV9-1A0A075B6T8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV9-1A0A075B6T8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV9-1A0A075B6T8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV9-1A0A075B6T8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV9-1A0A075B6T8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV9-1A0A075B6T8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV9-1A0A075B6T8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRAV9-1A0A075B6T8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV9-1A0A075B6T8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV9-1A0A075B6T8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV9-1A0A075B6T8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV9-1A0A075B6T8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV9-1A0A075B6T8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV9-1A0A075B6T8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV9-1A0A075B6T8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV9-1A0A075B6T8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV9-1A0A075B6T8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV9-1A0A075B6T8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV9-1A0A075B6T8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV9-1A0A075B6T8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV9-1A0A075B6T8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV9-1A0A075B6T8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV9-1A0A075B6T8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV9-1A0A075B6T8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRAV9-1A0A075B6T8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRAV9-1A0A075B6T8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV9-1A0A075B6T8 AC139530.1-201ENST00000575312 1977 ntBASIC17.02■□□□□ 0.32
TRAV9-1A0A075B6T8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV9-1A0A075B6T8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV9-1A0A075B6T8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV9-1A0A075B6T8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV9-1A0A075B6T8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV9-1A0A075B6T8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV9-1A0A075B6T8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV9-1A0A075B6T8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV9-1A0A075B6T8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV9-1A0A075B6T8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV9-1A0A075B6T8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV9-1A0A075B6T8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV9-1A0A075B6T8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
TRAV9-1A0A075B6T8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRAV9-1A0A075B6T8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV9-1A0A075B6T8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV9-1A0A075B6T8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV9-1A0A075B6T8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV9-1A0A075B6T8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV9-1A0A075B6T8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV9-1A0A075B6T8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV9-1A0A075B6T8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRAV9-1A0A075B6T8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRAV9-1A0A075B6T8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV9-1A0A075B6T8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV9-1A0A075B6T8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV9-1A0A075B6T8 AC026310.3-201ENST00000625186 2373 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms