Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRAV6A0A075B6T7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV6A0A075B6T7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV6A0A075B6T7 AC242852.2-201ENST00000615738 1807 ntBASIC19.41■□□□□ 0.7
TRAV6A0A075B6T7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV6A0A075B6T7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV6A0A075B6T7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV6A0A075B6T7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRAV6A0A075B6T7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV6A0A075B6T7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV6A0A075B6T7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV6A0A075B6T7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV6A0A075B6T7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV6A0A075B6T7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV6A0A075B6T7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV6A0A075B6T7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV6A0A075B6T7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
TRAV6A0A075B6T7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV6A0A075B6T7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV6A0A075B6T7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAV6A0A075B6T7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV6A0A075B6T7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV6A0A075B6T7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAV6A0A075B6T7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TRAV6A0A075B6T7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAV6A0A075B6T7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV6A0A075B6T7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAV6A0A075B6T7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV6A0A075B6T7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRAV6A0A075B6T7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV6A0A075B6T7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV6A0A075B6T7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV6A0A075B6T7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRAV6A0A075B6T7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRAV6A0A075B6T7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV6A0A075B6T7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV6A0A075B6T7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.38■□□□□ 0.69
TRAV6A0A075B6T7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
TRAV6A0A075B6T7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRAV6A0A075B6T7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV6A0A075B6T7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAV6A0A075B6T7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV6A0A075B6T7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRAV6A0A075B6T7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAV6A0A075B6T7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV6A0A075B6T7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV6A0A075B6T7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.37■□□□□ 0.69
TRAV6A0A075B6T7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV6A0A075B6T7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
TRAV6A0A075B6T7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TRAV6A0A075B6T7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV6A0A075B6T7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAV6A0A075B6T7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAV6A0A075B6T7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV6A0A075B6T7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV6A0A075B6T7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV6A0A075B6T7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRAV6A0A075B6T7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV6A0A075B6T7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV6A0A075B6T7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV6A0A075B6T7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV6A0A075B6T7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV6A0A075B6T7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV6A0A075B6T7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV6A0A075B6T7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV6A0A075B6T7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV6A0A075B6T7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV6A0A075B6T7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
TRAV6A0A075B6T7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV6A0A075B6T7 RNF165-205ENST00000588679 2904 ntBASIC19.35■□□□□ 0.69
TRAV6A0A075B6T7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV6A0A075B6T7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
TRAV6A0A075B6T7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV6A0A075B6T7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV6A0A075B6T7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV6A0A075B6T7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV6A0A075B6T7 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.33■□□□□ 0.69
TRAV6A0A075B6T7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV6A0A075B6T7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.33■□□□□ 0.69
TRAV6A0A075B6T7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV6A0A075B6T7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV6A0A075B6T7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV6A0A075B6T7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV6A0A075B6T7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRAV6A0A075B6T7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV6A0A075B6T7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV6A0A075B6T7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV6A0A075B6T7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TRAV6A0A075B6T7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV6A0A075B6T7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV6A0A075B6T7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV6A0A075B6T7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV6A0A075B6T7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV6A0A075B6T7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV6A0A075B6T7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAV6A0A075B6T7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.32■□□□□ 0.68
TRAV6A0A075B6T7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV6A0A075B6T7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV6A0A075B6T7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAV6A0A075B6T7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms