Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.27■□□□□ 0.19
TRBV25-1A0A075B6N4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV25-1A0A075B6N4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV25-1A0A075B6N4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TRBV25-1A0A075B6N4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.27■□□□□ 0.19
TRBV25-1A0A075B6N4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV25-1A0A075B6N4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV25-1A0A075B6N4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV25-1A0A075B6N4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV25-1A0A075B6N4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV25-1A0A075B6N4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRBV25-1A0A075B6N4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV25-1A0A075B6N4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV25-1A0A075B6N4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV25-1A0A075B6N4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRBV25-1A0A075B6N4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV25-1A0A075B6N4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV25-1A0A075B6N4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV25-1A0A075B6N4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV25-1A0A075B6N4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRBV25-1A0A075B6N4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV25-1A0A075B6N4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV25-1A0A075B6N4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRBV25-1A0A075B6N4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV25-1A0A075B6N4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV25-1A0A075B6N4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV25-1A0A075B6N4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TRBV25-1A0A075B6N4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.25■□□□□ 0.19
TRBV25-1A0A075B6N4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRBV25-1A0A075B6N4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV25-1A0A075B6N4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV25-1A0A075B6N4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV25-1A0A075B6N4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV25-1A0A075B6N4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV25-1A0A075B6N4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
TRBV25-1A0A075B6N4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV25-1A0A075B6N4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV25-1A0A075B6N4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV25-1A0A075B6N4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV25-1A0A075B6N4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV25-1A0A075B6N4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV25-1A0A075B6N4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
TRBV25-1A0A075B6N4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRBV25-1A0A075B6N4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRBV25-1A0A075B6N4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 AL121603.2-201ENST00000557373 2117 ntBASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRBV25-1A0A075B6N4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 AC133552.2-201ENST00000619106 1032 ntBASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV25-1A0A075B6N4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV25-1A0A075B6N4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRBV25-1A0A075B6N4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV25-1A0A075B6N4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.21■□□□□ 0.19
TRBV25-1A0A075B6N4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV25-1A0A075B6N4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV25-1A0A075B6N4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV25-1A0A075B6N4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV25-1A0A075B6N4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV25-1A0A075B6N4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
TRBV25-1A0A075B6N4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV25-1A0A075B6N4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV25-1A0A075B6N4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV25-1A0A075B6N4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV25-1A0A075B6N4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
TRBV25-1A0A075B6N4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms